ggKbase home page

rifcsplowo2_01_scaffold_8900_10

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_28_39

near complete RP 36 / 55 MC: 4 BSCG 8 / 51 ASCG 33 / 38
Location: comp(5577..6131)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12270.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 184.0
  • Bit_score: 363
  • Evalue 1.90e-97
50S ribosomal protein L9; K02933 large subunit ribosomal protein L6 id=5046855 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 182.0
  • Bit_score: 199
  • Evalue 3.40e-48
50S ribosomal protein L6P similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 177.0
  • Bit_score: 176
  • Evalue 8.80e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured archaeon → Archaea

Sequences

DNA sequence
Length: 555
ATGGAACGTACTTATAAAATTGAACTGGAAATTCCTGAAAAGGTTACTGTAATTGTAGAGAAAAGTTTAGTTAAAATAAAAGGACCTAAAGGAGAAGTACAGAGAGATTTTAATTATCCAAGAATTGAAATTGAAAAAACAGATAAGTCTATAATACTTAAAACTAAGAAAATTATTAAAGCTGTACAGAATGATAAAATGATTATTAATTCTTATGAATCACACATAAATAATATGTTTAAAGGAGCTTTAGATGGTTATTTTGCTAAAGTAAAAGTTTGTTCTGGACATTTTCCAATACAAGCTAAACTTGAGGGCAATGTATTACAAGTTAAAAACTTTTTAGGAGAAAAAATTCCCAGAAAAGCAGTAATTCCTGCAGGTGTAAAAGCTGAAGTTAAAGGAGATATTGTAGAATTGACTGGTGTTGATAAAGAAAAAGTTGGTCAAGCAGCAGCTAATATCGAGCAGTCGACCAGAATTACGAATAGGGATAGAAGAATATTCCAAGATGGTTGTTATATAATACTTAAACCTGGAGAAGTACAAAAATGA
PROTEIN sequence
Length: 185
MERTYKIELEIPEKVTVIVEKSLVKIKGPKGEVQRDFNYPRIEIEKTDKSIILKTKKIIKAVQNDKMIINSYESHINNMFKGALDGYFAKVKVCSGHFPIQAKLEGNVLQVKNFLGEKIPRKAVIPAGVKAEVKGDIVELTGVDKEKVGQAAANIEQSTRITNRDRRIFQDGCYIILKPGEVQK*