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rifcsplowo2_01_scaffold_8900

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_8900_1
unknown

Not on your lists

comp(111..608)
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8900_2
unknown

Not on your lists

comp(621..800)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8900_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(979..2364)
-----------------
DNA (1386bp)
protein (462aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5046863 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=AR18
Protein translocase subunit SecY
rifcsplowo2_01_scaffold_8900_4

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comp(2348..2815)
-----------------
DNA (468bp)
protein (156aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
rifcsplowo2_01_scaffold_8900_5
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(2817..3284)
-----------------
DNA (468bp)
protein (156aa)
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 id=5046860 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=AR18
50S ribosomal protein L30P
rifcsplowo2_01_scaffold_8900_6
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(3281..4000)
-----------------
DNA (720bp)
protein (240aa)
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=AR18
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=5046859 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S5
rifcsplowo2_01_scaffold_8900_7

Not on your lists


comp(3985..4572)
-----------------
DNA (588bp)
protein (196aa)
50S ribosomal protein L18P n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL18_NANEQ
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl18p; 50S ribosomal protein L18P
rifcsplowo2_01_scaffold_8900_8
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4569..5024)
-----------------
DNA (456bp)
protein (152aa)
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e id=5046857 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=AR18
50S ribosomal protein L19e
rifcsplowo2_01_scaffold_8900_9

Not on your lists

comp(5008..5580)
-----------------
DNA (573bp)
protein (191aa)
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5046856 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO54249.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
50S ribosomal protein L32e
rifcsplowo2_01_scaffold_8900_10

Not on your lists


comp(5577..6131)
-----------------
DNA (555bp)
protein (185aa)
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12270.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L9; K02933 large subunit ribosomal protein L6 id=5046855 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L6P
rifcsplowo2_01_scaffold_8900_11

Not on your lists


comp(6133..6525)
-----------------
DNA (393bp)
protein (131aa)
30S ribosomal protein S8 n=3 Tax=Methanotorris RepID=RS8_METIG id=5103267 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8
rifcsplowo2_01_scaffold_8900_12

Not on your lists


comp(6762..7274)
-----------------
DNA (513bp)
protein (171aa)
50S ribosomal protein L5 n=2 Tax=Methanotorris RepID=F6BD87_METIK id=5103265 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
rifcsplowo2_01_scaffold_8900_13

Not on your lists

comp(7271..7987)
-----------------
DNA (717bp)
protein (239aa)
30S ribosomal protein S4e; K02987 small subunit ribosomal protein S4e id=5046851 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
30S ribosomal protein S4e
rifcsplowo2_01_scaffold_8900_14

Not on your lists


comp(7989..8369)
-----------------
DNA (381bp)
protein (127aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5046850 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L24
rifcsplowo2_01_scaffold_8900_15

Not on your lists


comp(8375..8776)
-----------------
DNA (402bp)
protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5046849 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_8900_16

Not on your lists


comp(8773..9099)
-----------------
DNA (327bp)
protein (109aa)
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5046848 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
SSU ribosomal protein S11e (S17p)
rifcsplowo2_01_scaffold_8900_17

Not on your lists

comp(9092..9349)
-----------------
DNA (258bp)
protein (86aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035D6FA3
Marine sediment metagenome DNA, contig: S01H1_S33813 {ECO:0000313|EMBL:GAG38101.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ribonuclease P, Rpp29
rifcsplowo2_01_scaffold_8900_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9339..9659)
-----------------
DNA (321bp)
protein (107aa)
translation initiation factor SUI1; K03113 translation initiation factor 1 id=5046847 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
translation initiation factor SUI1; K03113 translation initiation factor 1 Tax=AR18
Protein translation factor SUI1-like protein
rifcsplowo2_01_scaffold_8900_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(9656..9874)
-----------------
DNA (219bp)
protein (73aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5046846 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=AR18
ribosomal protein L29
rifcsplowo2_01_scaffold_8900_20

Not on your lists


comp(9852..10661)
-----------------
DNA (810bp)
protein (270aa)
30S ribosomal protein S3 {ECO:0000313|EMBL:AJS12264.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5046845 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S3
rifcsplowo2_01_scaffold_8900_21

Not on your lists


comp(10658..11101)
-----------------
DNA (444bp)
protein (148aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl22p; 50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22 id=5046844 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L22P
rifcsplowo2_01_scaffold_8900_22
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11098..11496)
-----------------
DNA (399bp)
protein (133aa)
30S ribosomal protein S19P n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZNM4_THELI
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=AR17
rps19p; 30S ribosomal protein S19
rifcsplowo2_01_scaffold_8900_23

Not on your lists


comp(11499..12215)
-----------------
DNA (717bp)
protein (239aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12262.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein l2p; K02886 large subunit ribosomal protein L2 id=5046842 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribosomal protein L2
rifcsplowo2_01_scaffold_8900_24

Not on your lists


comp(12220..12483)
-----------------
DNA (264bp)
protein (88aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P
50S ribosomal protein L23P {ECO:0000313|EMBL:AJF62535.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_8900_25

Not on your lists


comp(12480..13250)
-----------------
DNA (771bp)
protein (257aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12261.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=5046840 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L4
rifcsplowo2_01_scaffold_8900_26

Not on your lists


comp(13247..14236)
-----------------
DNA (990bp)
protein (330aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5046839 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L3
rifcsplowo2_01_scaffold_8900_27
unknown

Not on your lists

14787..15263
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8900_28
R_OP11_45_11, Microgenomates, Bacteria

Not on your lists

comp(15651..16106)
-----------------
DNA (456bp)
protein (152aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_45_11_curated
Uncharacterized protein id=5799641 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_8900_29

Not on your lists

comp(16090..16650)
-----------------
DNA (561bp)
protein (187aa)
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53898.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_8900_30
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16750..17151)
-----------------
DNA (402bp)
protein (134aa)
id=5048831 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
Displaying items 1-30 of 43 in total

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