ggKbase home page

rifcsplowo2_01_scaffold_8900_26

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_28_39

near complete RP 36 / 55 MC: 4 BSCG 8 / 51 ASCG 33 / 38
Location: comp(13247..14236)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 329.0
  • Bit_score: 668
  • Evalue 5.00e-189
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5046839 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 330.0
  • Bit_score: 405
  • Evalue 4.30e-110
50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 332.0
  • Bit_score: 303
  • Evalue 6.50e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured archaeon → Archaea

Sequences

DNA sequence
Length: 990
ATGTCAAAAGTATACGGACCAAGGCATGGGAGTTTGCAATTCTGGCCTAGAAAGAAATCTAAAAAAATGACTGCCGGAGTTAAGTCATGGCCCAGATCTAAAAATACAACTCTTCAAGCTTTTTCAGGATACAAAGTTGGAATGACTCATATTGTCATAAAGGATACCAGGCCAACTTCAATGACTAAAAATGAAGAATTATTTTTACCAGTAACAATTTTAGAATGTCCTGCTTTGAAAGTTTTATCTATAAGATTTTATAAACCAGATCCTTATGGTAAAAAAGTTGCTTTAGAAATTTTGAATCCTAAACTTGATAAAAGCTTAGAAAGAAGATTAAGTTTACCTAAAAAATATAATTTTGAACAAAGGCTAAAAGAAGCCCAGGATCGTATTAGTGAGTTCAGTGAAGTGCATTTACTTGTTTATACACAACCTAAAAAAACCGGATTTGGAAAGAAAACTCCTGAAATCTTAGAATTTGGAATTGGTGGTAATGATATTAAATCAAAATTAGATTATGCGAAAGGTTTGTTTGATAAAGAGATTAAAGTAAGTGAAATAATAAAATCTGGTGCAAGAGTTGATGTTCATTCAGTTACAACAGGAAAAGGTTTTCAAAGTGTAGTAAAAAGATTTGGTATGCCATTGAGATCACATAAATCAGAAAAGAAAAGAAGAGCTTCTGTTCTTGGGCCTGAATTGCCTGGAAAAGTACATTGGGGTGTTCCTATGCCTGGAAGAATGGGATTTAATCTGAGAACTGAATATAACAGAGATATTATAATGGTTGATGATAAACCAGAAAAAATTAATCCAAAAGGCGGATTTTTACACTATGGTTTAATTAAAGCGGATTATGTTTTAGTAAAGGGCAGTATTCCCGGACCTTGCAAACGTCTAGTAACTCTTACAGAACCATTGAGACCTGGAAAATCATTTGGAAATAATTTTACTATACAATATATTAGCCAGGAGAGCAAGCAATGA
PROTEIN sequence
Length: 330
MSKVYGPRHGSLQFWPRKKSKKMTAGVKSWPRSKNTTLQAFSGYKVGMTHIVIKDTRPTSMTKNEELFLPVTILECPALKVLSIRFYKPDPYGKKVALEILNPKLDKSLERRLSLPKKYNFEQRLKEAQDRISEFSEVHLLVYTQPKKTGFGKKTPEILEFGIGGNDIKSKLDYAKGLFDKEIKVSEIIKSGARVDVHSVTTGKGFQSVVKRFGMPLRSHKSEKKRRASVLGPELPGKVHWGVPMPGRMGFNLRTEYNRDIIMVDDKPEKINPKGGFLHYGLIKADYVLVKGSIPGPCKRLVTLTEPLRPGKSFGNNFTIQYISQESKQ*