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rifcsplowo2_01_scaffold_13154

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13154_1
unknown

Not on your lists

comp(9..941)
-----------------
DNA (933bp)
protein (311aa)
UPI00003C8579 related cluster n=1 Tax=unknown RepID=UPI00003C8579 id=5103556 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
UPI00003C8579 related cluster n=1 Tax=unknown RepID=UPI00003C8579 Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_13154_2

Not on your lists

1045..1278
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein id=5046756 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45944.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_13154_3

Not on your lists

1280..1567
-----------------
DNA (288bp)
protein (96aa)
hypothetical protein id=5046755 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45943.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_13154_4
unknown

Not on your lists

comp(1564..2403)
-----------------
DNA (840bp)
protein (280aa)
Predicted GTPase of the OBG/HflX superfamily n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TW38_METKA id=5103555 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Predicted GTPase of the OBG/HflX superfamily n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TW38_METKA Tax=AR20
putative GTPase of the OBG/HflX superfamily
rifcsplowo2_01_scaffold_13154_5
unknown

Not on your lists

comp(2451..2900)
-----------------
DNA (450bp)
protein (150aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13154_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2926..3417)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein
id=5103698 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_13154_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

3605..4033
-----------------
DNA (429bp)
protein (143aa)
id=5049670 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR19
rifcsplowo2_01_scaffold_13154_8
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

4014..4637
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B743C
Protein containing Nucleotidyltransferase domain Tax=AR19
rifcsplowo2_01_scaffold_13154_9
unknown

Not on your lists

4757..4996
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13154_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

4974..6623
-----------------
DNA (1650bp)
protein (550aa)
Histone acetyltransferase Elp3 like protein; K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=RBG_13_Woesearchaeota_36_6_curated
Histone acetyltransferase Elp3 like protein; K07739 elongator complex protein 3 [EC:2.3.1.48] id=5044155 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Histone acetyltransferase Elp3 like protein
rifcsplowo2_01_scaffold_13154_11
unknown

Not on your lists

6625..7176
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13154_12
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

7223..7639
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein
id=5103696 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_13154_13
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

7858..8142
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_13154_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8146..9135)
-----------------
DNA (990bp)
protein (330aa)
hypothetical protein Tax=AR6
rifcsplowo2_01_scaffold_13154_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


9179..9469
-----------------
DNA (291bp)
protein (97aa)
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=CG_Woesearch_02
LSU ribosomal protein L21E id=5799708 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L21e
rifcsplowo2_01_scaffold_13154_16

Not on your lists

9479..9814
-----------------
DNA (336bp)
protein (112aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62971.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13154_17

Not on your lists

9832..10341
-----------------
DNA (510bp)
protein (170aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF62970.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13154_18
unknown

Not on your lists

comp(10397..10747)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13154_19

Not on your lists


10838..11323
-----------------
DNA (486bp)
protein (162aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_13154_20
unknown

Not on your lists

11331..11672
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13154_21
unknown

Not on your lists


11676..12239
-----------------
DNA (564bp)
protein (188aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK Tax=AR20
30S ribosomal protein S4
rifcsplowo2_01_scaffold_13154_22
unknown

Not on your lists


12236..12637
-----------------
DNA (402bp)
protein (134aa)
30S ribosomal protein S11 n=4 Tax=Desulfurococcales RepID=RS11_HYPBU id=5103688 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S11 n=4 Tax=Desulfurococcales RepID=RS11_HYPBU Tax=AR20
30S ribosomal protein S11
rifcsplowo2_01_scaffold_13154_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

12770..13360
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003816AF2
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_13154_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13357..13776
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003707988
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_13154_25

Not on your lists

13820..14593
-----------------
DNA (774bp)
protein (258aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_13154_26
unknown

Not on your lists

comp(14634..14930)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13154_27
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15173..17164
-----------------
DNA (1992bp)
protein (664aa)
Tetratricopeptide repeat protein id=2231855 bin=GWB2_Geobacter-like_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Tetratricopeptide repeat protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
rifcsplowo2_01_scaffold_13154_28
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

17318..17812
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein
id=5103817 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_13154_29
unknown

Not on your lists


17871..18233
-----------------
DNA (363bp)
protein (121aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF Tax=AR20
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_13154_30
unknown

Not on your lists


18235..18645
-----------------
DNA (411bp)
protein (137aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO Tax=AR20
50S ribosomal protein L13P
Displaying items 1-30 of 44 in total

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