ggKbase home page

rifcsplowo2_01_scaffold_39388

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_39388_1

Not on your lists

2..229
DNA (228bp) protein (76aa)
50S ribosomal protein L19e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV id=5103270 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_39388_2

Not on your lists


216..809
DNA (594bp) protein (198aa)
LSU ribosomal protein L18P n=1 Tax=nanoarchaeote Nst1 RepID=R1G9E4_9ARCH id=5103271 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_39388_3
unknown

Not on your lists


802..1593
DNA (792bp) protein (264aa)
30S ribosomal protein S5 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS5_NANEQ id=5103272 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S5 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS5_NANEQ Tax=AR20
30S ribosomal protein S5
rifcsplowo2_01_scaffold_39388_4
unknown

Not on your lists


1595..2056
DNA (462bp) protein (154aa)
50S ribosomal protein L30P n=7 Tax=Pyrococcus RepID=RL30_PYRAB id=5103273 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30P n=7 Tax=Pyrococcus RepID=RL30_PYRAB Tax=AR20
50S ribosomal protein L30P
rifcsplowo2_01_scaffold_39388_5

Not on your lists

2058..2387
DNA (330bp) protein (110aa)
Predicted MazG family pyrophosphatase n=1 Tax=Synechococcus sp. (strain WH7805) RepID=A4CUM8_SYNPV id=5087088 bin=GWF1_OP11_31_35_complete species=Synechococcus sp. WH 7805 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Putative MazG family pyrophosphatase {ECO:0000313|EMBL:KKQ57475.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
mazG; Predicted MazG family pyrophosphatase
rifcsplowo2_01_scaffold_39388_6

Not on your lists


2389..2835
DNA (447bp) protein (149aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV id=5103274 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15P
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_39388_7

Not on your lists

2836..4221
DNA (1386bp) protein (462aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=157937
rifcsplowo2_01_scaffold_39388_8
unknown

Not on your lists

4224..4670
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM id=5103276 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRS7_METIM Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_39388_9

Not on your lists

4672..4938
DNA (267bp) protein (89aa)
50S ribosomal protein L34e n=2 Tax=Methanobacterium RepID=K6TYY7_9EURY id=5103277 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_39388_10
unknown

Not on your lists

4935..5228
DNA (294bp) protein (98aa)
50S ribosomal protein L14e n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALY6_METOI id=5103278 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L14e n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALY6_METOI Tax=AR20
50S ribosomal protein L14e
rifcsplowo2_01_scaffold_39388_11

Not on your lists

5209..5628
DNA (420bp) protein (140aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA id=5103279 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Prefoldin subunit alpha
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_39388_12
unknown

Not on your lists

5660..5965
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 12 items

View Taxonomy