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rifcsplowo2_01_scaffold_1133

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1133_1
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3..674)
DNA (672bp) protein (224aa)
Cysteine--tRNA ligase n=2 Tax=Dictyoglomus RepID=SYC_DICT6 id=5103307 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cysteine--tRNA ligase Tax=GWA2_OP11_42_12
Cysteine-tRNA ligase
rifcsplowo2_01_scaffold_1133_2
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

887..2269
DNA (1383bp) protein (461aa)
Dead box RNA helicase n=2 Tax=Methanococcoides burtonii RepID=Q12UP5_METBU
DEAD/DEAH box helicase-like protein
Dead box RNA helicase {ECO:0000313|EMBL:ABE52831.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides
rifcsplowo2_01_scaffold_1133_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2273..3220)
DNA (948bp) protein (316aa)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:571 RepID=R5XP11_9CLOT
hypothetical protein Tax=CG_Pacearch_06
NifR3 family TIM-barrel domain-containing protein
rifcsplowo2_01_scaffold_1133_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3267..3584
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ71_METH6
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_1133_5
unknown

Not on your lists

3628..4176
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA id=5103857 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_1133_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

4173..4616
DNA (444bp) protein (148aa)
hypothetical protein
id=3832836 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR20
rifcsplowo2_01_scaffold_1133_7
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


4618..6066
DNA (1449bp) protein (483aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Pacearch_02
Proline--tRNA ligase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI64_9EURY id=5102935 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proline-tRNA ligase
rifcsplowo2_01_scaffold_1133_8
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

6289..8025
DNA (1737bp) protein (579aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=IF2P_METKA
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Pacearch_02
InfB_2; translation initiation factor IF-2
rifcsplowo2_01_scaffold_1133_9
RIFOXYD1_FULL_WWE3_43_17_curated, WWE3, Bacteria

Not on your lists

comp(8015..9220)
DNA (1206bp) protein (402aa)
superfamily I helicase (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFOXYD1_FULL_WWE3_43_17_curated
rifcsplowo2_01_scaffold_1133_10
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


9308..9715
DNA (408bp) protein (136aa)
SSU ribosomal protein s6e; K02991 small subunit ribosomal protein S6e Tax=CG_Pacearch_02
30S ribosomal protein S6e id=4010277 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S6e
rifcsplowo2_01_scaffold_1133_11
unknown

Not on your lists

9757..10206
DNA (450bp) protein (150aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1133_12
unknown

Not on your lists

10496..10666
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1133_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


10730..11911
DNA (1182bp) protein (394aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=IF2G_METM5
translation initiation factor 2 subunit gamma (aeif-2g); K03242 translation initiation factor 2 subunit 3 Tax=CG_Pacearch_03
translation initiation factor IF-2 subunit gamma
rifcsplowo2_01_scaffold_1133_14
RBG_13_Bacteroidetes_44_24_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11908..12372
DNA (465bp) protein (155aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RBG_13_Bacteroidetes_44_24_curated
Putative Fe-S oxidoreductase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JHX2_9CLOT
putative Fe-S oxidoreductase
rifcsplowo2_01_scaffold_1133_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


12424..13026
DNA (603bp) protein (201aa)
DNA-directed RNA polymerase (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] Tax=CG_Pacearch_06
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_1133_16
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

13173..13367
DNA (195bp) protein (65aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6); K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] Tax=CG_Pacearch_02
DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U3D4_THEAM
rifcsplowo2_01_scaffold_1133_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13364..13672
DNA (309bp) protein (103aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_1133_18
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

13673..13897
DNA (225bp) protein (75aa)
rps27AE; 30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae Tax=AR13
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae id=5049718 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S27ae
rifcsplowo2_01_scaffold_1133_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

14239..15285
DNA (1047bp) protein (349aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVZ3_9EURY id=5103660 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_03
Chromosome segregation and condensation protein ScpA
rifcsplowo2_01_scaffold_1133_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(15289..16512)
DNA (1224bp) protein (408aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Pacearch_02
Histidine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT id=5103662 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine-tRNA ligase
rifcsplowo2_01_scaffold_1133_21
unknown

Not on your lists

comp(16537..16968)
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1133_22
unknown

Not on your lists

comp(17001..17240)
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1133_23
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17329..17868)
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:AKB14523.1}; EC=5.2.1.8 {ECO:0000313|EMBL:AKB14523.1};; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methano
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C070_METCG
ppiA; peptidyl-prolyl cis-trans isomerase
rifcsplowo2_01_scaffold_1133_24
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

18115..18396
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EK09_9BACT
transmembrane_regions Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_1133_25
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

18398..18565
DNA (168bp) protein (56aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_1133_26
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

18582..18953
DNA (372bp) protein (124aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_1133_27
unknown

Not on your lists

18964..19461
DNA (498bp) protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1133_28
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19471..19752)
DNA (282bp) protein (94aa)
PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=RBG_13_Pacearchaeota_36_9_curated
PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=5046268 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
rifcsplowo2_01_scaffold_1133_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

20305..20922
DNA (618bp) protein (206aa)
peptidase S54, rhomboid family protein; K07059 Tax=RBG_13_Pacearchaeota_36_9_curated
peptidase S54, rhomboid family protein; K07059 id=18248414 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
peptidase S54, rhomboid family protein
rifcsplowo2_01_scaffold_1133_30
unknown

Not on your lists

20924..21142
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 63 in total

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