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rifcsplowo2_01_scaffold_8258

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_8258_1
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(3..659)
DNA (657bp) protein (219aa)
DNA-directed RNA polymerase sigma 70 factor n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PAZ3_DEFDS
DNA-directed RNA polymerase sigma 70 factor
DNA-directed RNA polymerase sigma 70 factor {ECO:0000313|EMBL:BAI79766.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacte
rifcsplowo2_01_scaffold_8258_2
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(723..908)
DNA (186bp) protein (62aa)
Marine sediment metagenome DNA, contig: S03H2_L00138 Tax=CG_Pacearch_03
Preprotein translocase subunit SecE id=5050966 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
protein translocase SEC61 complex, gamma subunit; K07342 protein transport protein SEC61 subunit gamma and related proteins
rifcsplowo2_01_scaffold_8258_3
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

1013..1237
DNA (225bp) protein (75aa)
hypothetical protein
id=5103473 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR19
rifcsplowo2_01_scaffold_8258_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

1230..1535
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGP2_9EURY id=5103474 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=AR9
rifcsplowo2_01_scaffold_8258_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(1590..2681)
DNA (1092bp) protein (364aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ
cell division protein FtsZ Tax=CG_Pacearch_03
Cell division protein FtsZ
rifcsplowo2_01_scaffold_8258_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2748..3422)
DNA (675bp) protein (225aa)
FKBP-type peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=CG_Pacearch_03
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=sediment metagenome RepID=D9PEV4_9ZZZZ
peptidylprolyl isomerase FKBP-type
rifcsplowo2_01_scaffold_8258_7
CG_Pacearch_02, Pacearchaeota, Archaea

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3473..3862
DNA (390bp) protein (130aa)
Translation initiation factor 5A n=1 Tax=sediment metagenome RepID=D9PEV2_9ZZZZ
translation initiation factor IF-5A; K03263 translation initiation factor 5A Tax=CG_Pacearch_02
translation initiation factor IF-5A
rifcsplowo2_01_scaffold_8258_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

3865..4029
DNA (165bp) protein (55aa)
id=5800377 Tax=CG_Pacearch_03
id=5800377 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_8258_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

4034..5410
DNA (1377bp) protein (459aa)
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY id=5103023 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
peptidase M50 Tax=CG_Pacearch_02
Peptidase M50
rifcsplowo2_01_scaffold_8258_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5433..5786)
DNA (354bp) protein (118aa)
hypothetical protein
id=5103013 Tax=CG_Pacearch_06
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_8258_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

5837..6286
DNA (450bp) protein (150aa)
hypothetical protein
id=5800786 Tax=CG_Pacearch_06
id=5800786 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_8258_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


6447..6938
DNA (492bp) protein (164aa)
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=CG_Pacearch_06
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_8258_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


6938..7693
DNA (756bp) protein (252aa)
rpl11p; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Pacearch_06
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5050963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_8258_14
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

7807..8610
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50571.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Putative uncharacterized protein id=5050711 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_8258_15
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8689..9831)
DNA (1143bp) protein (381aa)
UPI0003D1BB4E related cluster n=1 Tax=unknown RepID=UPI0003D1BB4E
Putative transcriptional regulator with HTH domain {ECO:0000313|EMBL:ETA68262.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;"
AAA ATPase
rifcsplowo2_01_scaffold_8258_16
unknown

Not on your lists

9939..10607
DNA (669bp) protein (223aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8258_17
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

10668..10895
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Ectocarpus siliculosus RepID=D7FP42_ECTSI
50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
rpl37ae; 50S ribosomal protein L37
rifcsplowo2_01_scaffold_8258_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10926..11063
DNA (138bp) protein (46aa)
Marine sediment metagenome DNA, contig: S12H4_L00299 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_8258_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11060..11401
DNA (342bp) protein (114aa)
prefoldin subunit beta; K04798 prefoldin beta subunit Tax=RBG_16_Pacearchaeota_35_8_curated
erpK protein; K04798 prefoldin beta subunit id=5050960 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta
rifcsplowo2_01_scaffold_8258_20
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

11464..11847
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
rifcsplowo2_01_scaffold_8258_21
unknown

Not on your lists

11902..12102
DNA (201bp) protein (67aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8258_22
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12122..12502)
DNA (381bp) protein (127aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
rifcsplowo2_01_scaffold_8258_23
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

12594..14510
DNA (1917bp) protein (639aa)
Marine sediment metagenome DNA, contig: S03H2_S04299 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
seg id=5800732 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_8258_24
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

14583..15116
DNA (534bp) protein (178aa)
Marine sediment metagenome DNA, contig: S01H1_S02180 Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_8258_25
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

15113..15355
DNA (243bp) protein (81aa)
Membrane protein, DedA family n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KSE2_CLOBM
hypothetical protein; K03975 membrane-associated protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
DedA family membrane protein
Displaying 25 items

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