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rifcsplowo2_01_scaffold_7490

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_7490_1

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comp(3..188)
DNA (186bp) protein (62aa)
Aminotransferase, class V n=1 Tax=sediment metagenome RepID=D9PK81_9ZZZZ
Aminotransferase, class V {ECO:0000313|EMBL:EFK96042.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
aminotransferase, class V
rifcsplowo2_01_scaffold_7490_2
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

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comp(185..550)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PK80_9ZZZZ id=5103559 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07108 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_7490_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(616..1416)
DNA (801bp) protein (267aa)
2-oxoacid ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036744AE
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
rifcsplowo2_01_scaffold_7490_4
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(1413..2909)
DNA (1497bp) protein (499aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_13_Pacearchaeota_33_26_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365D8E8
2-oxoacid ferredoxin oxidoreductase, subunit alpha
rifcsplowo2_01_scaffold_7490_5
unknown

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comp(3006..3239)
DNA (234bp) protein (78aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7490_6
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(3306..4178)
DNA (873bp) protein (291aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_16_Bathyarchaeota_57_9_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS04_9BACT
rifcsplowo2_01_scaffold_7490_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4289..4738)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BE02E
hypothetical protein Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_7490_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4748..6412)
DNA (1665bp) protein (555aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEL5_9EURY id=5102895 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
secd/secf/secdf export membrane protein; K03072 preprotein translocase subunit SecD Tax=RBG_13_Pacearchaeota_36_9_curated
SecD/SecF/SecDF export membrane protein
rifcsplowo2_01_scaffold_7490_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(6409..7302)
DNA (894bp) protein (298aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=RBG_13_Pacearchaeota_36_9_curated
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5045761 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protein-export membrane protein SecF
rifcsplowo2_01_scaffold_7490_10
GWB1_OP11_44_11_partial, Woesebacteria, Microgenomates, Bacteria

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comp(7523..9394)
DNA (1872bp) protein (624aa)
adenylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] id=5094830 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
adenylate cyclase (EC:4.6.1.1)
Adenylate cyclase Tax=GWB1_OP11_44_11_partial
rifcsplowo2_01_scaffold_7490_11

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comp(9419..10279)
DNA (861bp) protein (287aa)
Marine sediment metagenome DNA, contig: S01H1_S23099 {ECO:0000313|EMBL:GAG16301.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_7490_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

10763..11017
DNA (255bp) protein (85aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_7490_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(11107..11304)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Pacearch_06
DNA-directed RNA polymerase subunit N n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DAD7_STAHD
RNA polymerase, N/8 Kd subunit
rifcsplowo2_01_scaffold_7490_14
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

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11459..11635
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037944A6
hypothetical protein Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
hypothetical protein
rifcsplowo2_01_scaffold_7490_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

11830..12036
DNA (207bp) protein (69aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_7490_16
CG_Pacearch_03, Pacearchaeota, Archaea

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12089..12349
DNA (261bp) protein (87aa)
50S ribosomal protein L21e n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7V9_METSL
rpl21E; 50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=CG_Pacearch_03
rpl21E; 50S ribosomal protein L21e
rifcsplowo2_01_scaffold_7490_17
CG_Pacearch_06, Pacearchaeota, Archaea

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12346..12645
DNA (300bp) protein (100aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_7490_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12701..13240
DNA (540bp) protein (180aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07572 putative nucleotide binding protein Tax=RBG_13_Pacearchaeota_36_9_curated
DNA-binding protein
rifcsplowo2_01_scaffold_7490_19
CG_Pacearch_02, Pacearchaeota, Archaea

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13242..13778
DNA (537bp) protein (179aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps13p; 30S ribosomal protein S13p; K02952 small subunit ribosomal protein S13 Tax=CG_Pacearch_02
30S ribosomal protein S13
rifcsplowo2_01_scaffold_7490_20
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


13775..14344
DNA (570bp) protein (190aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Pacearch_03
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=18248037 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S9e (S4p)
rifcsplowo2_01_scaffold_7490_21
CG_Pacearch_02, Pacearchaeota, Archaea

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14341..14904
DNA (564bp) protein (188aa)
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=CG_Pacearch_02
30S ribosomal protein S11 id=14427413 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rps11p; 30S ribosomal protein S11
rifcsplowo2_01_scaffold_7490_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

15001..15699
DNA (699bp) protein (233aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=CG_Pacearch_06
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_7490_23
unknown

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comp(15730..16116)
DNA (387bp) protein (129aa)

This feature has no annotations

Displaying 23 items

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