ggKbase home page

rifcsplowo2_01_scaffold_3109

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3109_1

Not on your lists

comp(3..4250)
DNA (4248bp) protein (1416aa)
cell surface protein id=5043703 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Cell surface protein {ECO:0000313|EMBL:KHO47019.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsplowo2_01_scaffold_3109_2

Not on your lists

comp(4240..4740)
DNA (501bp) protein (167aa)
id=5047280 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45452.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_3109_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

5222..7057
DNA (1836bp) protein (612aa)
hypothetical protein; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] Tax=RBG_13_Woesearchaeota_36_6_curated
ATP dependent helicase id=5799755 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP dependent helicase
rifcsplowo2_01_scaffold_3109_4
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7250..7528
DNA (279bp) protein (93aa)
Putative Pterin 4 alpha carbinolamine dehydratase n=2 Tax=environmental samples RepID=B3T605_9ARCH id=35827 bin=ACD30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKQ14795.1}; TaxID=1618417 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_36_8.;"
transcriptional coactivator/pterin dehydratase
rifcsplowo2_01_scaffold_3109_5
GWA2_OP11_40_7b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7599..8009
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR73123.1}; TaxID=1618562 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_40_7.;"
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_3109_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8301..8834
DNA (534bp) protein (178aa)
Metal dependent phosphohydrolase n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P8G3_METFA
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=CG_Woesearch_02
metal dependent phosphohydrolase
rifcsplowo2_01_scaffold_3109_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8848..9135)
DNA (288bp) protein (96aa)
Putative uncharacterized protein id=5800618 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_3109_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

9431..11965
DNA (2535bp) protein (845aa)
alaS; alanine--tRNA ligase/alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=AR11
Alanine--tRNA ligase id=5799660 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_3109_9
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

12325..13860
DNA (1536bp) protein (512aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=CG_Woesearch_03
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YWZ9_9THEM
rifcsplowo2_01_scaffold_3109_10
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

13863..15269
DNA (1407bp) protein (469aa)
leuC; isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
isopropylmalate isomerase n=1 Tax=Schlesneria paludicola RepID=UPI00029B4843 rbh
rifcsplowo2_01_scaffold_3109_11
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

15271..15891
DNA (621bp) protein (207aa)
3-isopropylmalate dehydratase, small subunit n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YSR2_9EURY
3-isopropylmalate dehydratase, small subunit Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
isopropylmalate isomerase
rifcsplowo2_01_scaffold_3109_12
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

15888..16955
DNA (1068bp) protein (356aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=CG_Woesearch_03
3-isopropylmalate dehydrogenase n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PMK9_9PAST
3-isopropylmalate dehydrogenase
rifcsplowo2_01_scaffold_3109_13
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(16958..17716)
DNA (759bp) protein (253aa)
Tax=CG_Pacearch_04
rifcsplowo2_01_scaffold_3109_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17713..18876)
DNA (1164bp) protein (388aa)
hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_3109_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18945..19565)
DNA (621bp) protein (207aa)
Methyltransferase type 11 n=1 Tax=alpha proteobacterium BAL199 RepID=A8U2J7_9PROT
Methyltransferase type 11 {ECO:0000313|EMBL:EDP61615.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
rifcsplowo2_01_scaffold_3109_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

19656..20696
DNA (1041bp) protein (347aa)
hypothetical protein
Phosphoesterase, DHHA1 Tax=CG_Woesearch_02
DHH phosphoesterases id=5800602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_3109_17
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

20705..21298
DNA (594bp) protein (198aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcale
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L002_9EURY
phosphatidylserine decarboxylase proenzyme
rifcsplowo2_01_scaffold_3109_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

21285..22388
DNA (1104bp) protein (368aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1B9_9GAMM
CDP-diacylglycerol/serine O-phosphatidyltransferase Tax=AR11
CDP-diacylglycerol/serine O-phosphatidyltransferase
rifcsplowo2_01_scaffold_3109_19
CG_CPR02_01, CG_CPR02, Bacteria

Not on your lists

comp(22649..23287)
DNA (639bp) protein (213aa)
glycosyl transferase family 2 Tax=CG_CPR02_01
Glycosyl transferase family 2 id=2009058 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
glycosyltransferase
rifcsplowo2_01_scaffold_3109_20
unknown

Not on your lists

23411..23974
DNA (564bp) protein (188aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3109_21
R_RIF_OD1_03_52_15, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

24115..24969
DNA (855bp) protein (285aa)
putative glycosyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_52_15_curated
Glycosyl transferase family 2 id=4178381 bin=GWF2_Ignavibacteria_35_20 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative glycosyltransferase
rifcsplowo2_01_scaffold_3109_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24970..28443)
DNA (3474bp) protein (1158aa)
Chromosome partition protein Smc Tax=AR11
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
rifcsplowo2_01_scaffold_3109_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(28541..29095)
DNA (555bp) protein (185aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ribonuclease
rifcsplowo2_01_scaffold_3109_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

29314..29619
DNA (306bp) protein (102aa)
Marine sediment metagenome DNA, contig: S12H4_L01165 Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_3109_25
Halobacillus halophilus, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29624..30535)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JR61_HALH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG46631.1}; TaxID=866895 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus halophilus (strain ATCC 35676
rifcsplowo2_01_scaffold_3109_26

Not on your lists

30786..32969
DNA (2184bp) protein (728aa)
transglutaminase domain protein id=5049172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transglutaminase protein {ECO:0000313|EMBL:KHO45163.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transglutaminase protein
rifcsplowo2_01_scaffold_3109_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

32994..34814
DNA (1821bp) protein (607aa)
Uncharacterized protein n=4 Tax=Pyrococcus RepID=Q8U211_PYRFU id=5103802 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATPase; K06865 ATPase Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_3109_28

Not on your lists

comp(35599..35931)
DNA (333bp) protein (111aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
Ribonuclease P protein component 4 id=5799801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribonuclease P subunit RPR2
rifcsplowo2_01_scaffold_3109_29
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35964..37184)
DNA (1221bp) protein (407aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1128398 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AW49_CLOA9
rifcsplowo2_01_scaffold_3109_30
unknown

Not on your lists

37325..38215
DNA (891bp) protein (297aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

View Taxonomy