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rifcsplowo2_01_scaffold_3576

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3576_1
AR5, Aenigmarchaeota, DPANN, Archaea

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2..1036
DNA (1035bp) protein (345aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=18248281 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=AR5
valS; valyl-tRNA ligase (EC:6.1.1.9)
rifcsplowo2_01_scaffold_3576_2
AR15, Woesearchaeaota, DPANN, Archaea

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1033..2136
DNA (1104bp) protein (368aa)
Peptide chain release factor subunit 1 id=5800374 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptide chain release factor subunit 1 Tax=AR15
peptide chain release factor
rifcsplowo2_01_scaffold_3576_3
unknown

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2192..2392
DNA (201bp) protein (67aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_4
unknown

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2393..3958
DNA (1566bp) protein (522aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_5
CG_Woesearch_03, Woesearchaeota, Archaea

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3975..4748
DNA (774bp) protein (258aa)
Tax=CG_Woesearch_03
rifcsplowo2_01_scaffold_3576_6
unknown

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4745..5242
DNA (498bp) protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_7
AR18, Woesearchaeaota, DPANN, Archaea

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5275..5844
DNA (570bp) protein (190aa)
segregation and condensation protein B; K06024 segregation and condensation protein B id=5044965 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
segregation and condensation protein B; K06024 segregation and condensation protein B Tax=AR18
Segregation and condensation protein B
rifcsplowo2_01_scaffold_3576_8

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5834..7330
DNA (1497bp) protein (499aa)
hypothetical protein
id=5103316 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62597.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_3576_9

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7269..8777
DNA (1509bp) protein (503aa)
hypothetical protein
id=5103317 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62598.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_3576_10
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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8788..10002
DNA (1215bp) protein (405aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY id=5103318 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
glucosaminyltransferase Tax=RBG_16_Micrarchaeota_49_10_curated
Glycosyltransferase involved in cell wall biogenesis
rifcsplowo2_01_scaffold_3576_11

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9996..10655
DNA (660bp) protein (220aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG11109.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
id=5044968 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_3576_12
unknown

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10633..11985
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=5 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAF4_9EURY id=5103320 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=5 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAF4_9EURY Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_3576_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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12036..12476
DNA (441bp) protein (147aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQL5_ACIS0 id=5103321 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K03627 putative transcription factor Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsplowo2_01_scaffold_3576_14

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12469..13065
DNA (597bp) protein (199aa)
RNA methylase; K07579 putative methylase id=5044974 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54574.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA methylase
rifcsplowo2_01_scaffold_3576_15
unknown

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comp(13068..13370)
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_16

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13424..13699
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase subunit L n=2 Tax=Methanobacterium RepID=K6SZJ9_9EURY id=5103326 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit L
rifcsplowo2_01_scaffold_3576_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(13772..15373)
DNA (1602bp) protein (534aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RBG_13_Woesearchaeota_36_6_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FDF8_9DELT
rifcsplowo2_01_scaffold_3576_18

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15491..16123
DNA (633bp) protein (211aa)
Marine sediment metagenome DNA, contig: S12H4_L00950 {ECO:0000313|EMBL:GAI82642.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_3576_19

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16101..16448
DNA (348bp) protein (116aa)
Transcription-associated protein TFIIS n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZ68_9EURY id=5103330 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S38339 {ECO:0000313|EMBL:GAG48814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Transcription-associated protein TFIIS
rifcsplowo2_01_scaffold_3576_20
unknown

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16498..16791
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_21
unknown

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16829..17326
DNA (498bp) protein (166aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_22
unknown

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17376..17867
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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17902..18318
DNA (417bp) protein (139aa)
hypothetical protein
seg Tax=RBG_13_Woesearchaeota_36_6_curated
id=5103206 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_3576_24

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18358..19104
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B7809
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579376 species="Arch
DNA polymerase sliding clamp
rifcsplowo2_01_scaffold_3576_25
unknown

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comp(19118..19450)
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3576_26
AR4, Woesearchaeaota, DPANN, Archaea

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19594..20307
DNA (714bp) protein (238aa)
Transcriptional regulator TrmB id=5041694 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator TrmB Tax=AR4
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_3576_27
AR20, Woesearchaeaota, DPANN, Archaea

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20354..21133
DNA (780bp) protein (260aa)
hypothetical protein
id=5103336 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_3576_28
AR20, Woesearchaeaota, DPANN, Archaea

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21154..23862
DNA (2709bp) protein (903aa)
hypothetical protein
id=5103337 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
Displaying 28 items

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