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rifcsplowo2_01_scaffold_14934

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_14934_1
unknown

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50..793
-----------------
DNA (744bp)
protein (248aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14934_2
GWA2_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1219..1518)
-----------------
DNA (300bp)
protein (100aa)
CutA1 divalent ion tolerance protein n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LX90_9FUSO
divalent cation tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=GWA2_Deltaproteobacteria_47_9_curated
CutA1 divalent ion tolerance protein
rifcsplowo2_01_scaffold_14934_3
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1527..2480)
-----------------
DNA (954bp)
protein (318aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZWY2_THEET
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source=
magnesium and cobalt transport protein CorA
rifcsplowo2_01_scaffold_14934_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2795..4015)
-----------------
DNA (1221bp)
protein (407aa)
ychF; translation-associated GTPase; K06942 Tax=CG_Woesearch_02
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_14934_5
unknown

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4072..4650
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14934_6
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(4660..5271)
-----------------
DNA (612bp)
protein (204aa)
TRK system potassium uptake protein TrkA n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QDT4_METFO
TRK system potassium uptake protein TrkA {ECO:0000313|EMBL:EKF86216.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" sou
trkA1; Trk system potassium uptake protein TrkA homolog
rifcsplowo2_01_scaffold_14934_7

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comp(5297..6757)
-----------------
DNA (1461bp)
protein (487aa)
Cation transport protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IBJ0_ACIB4
Potassium transporter (TrkH) {ECO:0000313|EMBL:AIF06747.1}; TaxID=1457970 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_195_B08.;"
cation transporter
rifcsplowo2_01_scaffold_14934_8
CG_Micra_05, Micraarchaeota, Archaea

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comp(7244..7819)
-----------------
DNA (576bp)
protein (192aa)
Protein containing DUF655 n=1 Tax=mine drainage metagenome RepID=T0ZZL3_9ZZZZ
RNA-binding protein; K07572 putative nucleotide binding protein Tax=CG_Micra_05
RNA-binding protein
rifcsplowo2_01_scaffold_14934_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(7835..8158)
-----------------
DNA (324bp)
protein (108aa)
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6) Tax=RBG_16_Micrarchaeota_36_9_curated
RNA polymerase Rpb4 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAV6_METEZ
RNA polymerase Rpb4
rifcsplowo2_01_scaffold_14934_10
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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comp(8155..8433)
-----------------
DNA (279bp)
protein (93aa)
50S ribosomal protein L21e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL21_METKA
RPL21A; 50S ribosomal protein L21
50S ribosomal protein L21e {ECO:0000255|HAMAP-Rule:MF_00369}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri
rifcsplowo2_01_scaffold_14934_11
CG_Micra_05, Micraarchaeota, Archaea

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8560..9120
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein Tax=CG_Micra_05
transcription initiation factor TFIID TATA-box-binding protein
transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5241036 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_14934_12
unknown

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9126..9647
-----------------
DNA (522bp)
protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14934_13
CG_Micra_05, Micraarchaeota, Archaea

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comp(9618..9911)
-----------------
DNA (294bp)
protein (98aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8R0_METMS
hypothetical protein Tax=CG_Micra_05
hypothetical protein
rifcsplowo2_01_scaffold_14934_14
unknown

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comp(9911..10168)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsplowo2_01_scaffold_14934_15
CG_Micra_01, Micraarchaeota, Archaea

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comp(10202..10906)
-----------------
DNA (705bp)
protein (235aa)
Phosphoesterase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TCE1_ACIB4
Metallophosphoesterase Tax=CG_Micra_01
phosphoesterase
Displaying 15 items

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