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rifcsplowo2_01_scaffold_35381

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_35381_1
unknown

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3..356
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35381_2
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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469..1230
-----------------
DNA (762bp)
protein (254aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=647171 species="A
Tryptophan synthase alpha chain n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KY20_9EURY
tryptophan synthase subunit alpha TrpA
rifcsplowo2_01_scaffold_35381_3
CG_Micra_05, Micraarchaeota, Archaea

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comp(1227..2180)
-----------------
DNA (954bp)
protein (318aa)
gltX; glutamate--tRNA ligase (EC:6.1.1.17) Tax=CG_Micra_05
glutamyl-tRNA synthetase (EC:6.1.1.18)
Glutamyl-tRNA synthetase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T564_9EURY
rifcsplowo2_01_scaffold_35381_4
CG_Micra_05, Micraarchaeota, Archaea

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comp(2209..2952)
-----------------
DNA (744bp)
protein (248aa)
gltX; glutamate--tRNA ligase (EC:6.1.1.17) Tax=CG_Micra_05
gltX; Glutamate--tRNA ligase (EC:6.1.1.17)
Glutamine--tRNA ligase n=1 Tax=mine drainage metagenome RepID=T0YN40_9ZZZZ
rifcsplowo2_01_scaffold_35381_5
unknown

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comp(2952..3380)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35381_6
CG_Micra_05, Micraarchaeota, Archaea

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3546..4511
-----------------
DNA (966bp)
protein (322aa)
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=CG_Micra_05
Carbamoyl-phosphate synthase small chain n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=CARA_ARCFU
Carbamoyl-phosphate synthase small chain
rifcsplowo2_01_scaffold_35381_7
unknown

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4622..5485
-----------------
DNA (864bp)
protein (288aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35381_8
CG_Micra_01, Micraarchaeota, Archaea

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5547..8630
-----------------
DNA (3084bp)
protein (1028aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=CG_Micra_01
Carbamoyl-phosphate synthase large chain n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2G7_FERPA
carbamoyl-phosphate synthase, large subunit
rifcsplowo2_01_scaffold_35381_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8998..9228)
-----------------
DNA (231bp)
protein (77aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EEU5_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85127.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
rifcsplowo2_01_scaffold_35381_10
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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9267..10562
-----------------
DNA (1296bp)
protein (432aa)
Ribulose bisphosphate carboxylase {ECO:0000256|HAMAP-Rule:MF_01133}; Short=RuBisCO {ECO:0000256|HAMAP-Rule:MF_01133};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01133};; TaxID=593750 species="Archaea; Eu
Ribulose bisphosphate carboxylase, type III n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEQ2_METFS rbh
ribulose bisphosphate carboxylase, type III
rifcsplowo2_01_scaffold_35381_11
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

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comp(10563..12398)
-----------------
DNA (1836bp)
protein (612aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000368B924
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
rifcsplowo2_01_scaffold_35381_12

Not on your lists

12496..13458
-----------------
DNA (963bp)
protein (321aa)
Putative Protease HtpX homolog {ECO:0000313|EMBL:CEG12647.1}; EC=3.4.24.- {ECO:0000313|EMBL:CEG12647.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="g
Protease HtpX homolog id=4120972 bin=PER_GWC2_41_7 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
heat shock protein
rifcsplowo2_01_scaffold_35381_13
unknown

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13555..14232
-----------------
DNA (678bp)
protein (226aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35381_14
unknown

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comp(14416..14499)
-----------------
DNA (84bp)
protein (28aa)

This feature has no annotations

Displaying 14 items

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