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rifcsplowo2_01_scaffold_10183

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10183_1
AR6, Pacearchaeaota, DPANN, Archaea

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2..733
-----------------
DNA (732bp)
protein (244aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=AR6
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin reductase TrxB-3
rifcsplowo2_01_scaffold_10183_2
AR5, Aenigmarchaeota, DPANN, Archaea

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749..1369
-----------------
DNA (621bp)
protein (207aa)
peptidase S54, rhomboid family protein; K07059 id=5044480 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
peptidase S54, rhomboid family protein; K07059 Tax=AR5
peptidase S54, rhomboid family protein
rifcsplowo2_01_scaffold_10183_3
unknown

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comp(1371..1832)
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_4
unknown

Not on your lists

1883..2413
-----------------
DNA (531bp)
protein (177aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_5
unknown

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2619..3089
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_6
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(3183..3626)
-----------------
DNA (444bp)
protein (148aa)
PUA domain containing protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSW6_METIM
PUA domain containing protein
PUA domain containing protein {ECO:0000313|EMBL:ADG13669.1}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanoca
rifcsplowo2_01_scaffold_10183_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3678..4127
-----------------
DNA (450bp)
protein (150aa)
hypothetical protein; K09005 hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
hypothetical protein; K09005 hypothetical protein id=982846 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
rifcsplowo2_01_scaffold_10183_8
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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4425..5132
-----------------
DNA (708bp)
protein (236aa)
Diphthine synthase {ECO:0000256|HAMAP-Rule:MF_01084}; EC=2.1.1.98 {ECO:0000256|HAMAP-Rule:MF_01084};; Diphthamide biosynthesis methyltransferase {ECO:0000256|HAMAP-Rule:MF_01084}; TaxID=1069083 specie
diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VTC6_9EURY
rifcsplowo2_01_scaffold_10183_9
GWC2_OP9X_49_35_curated, OP9X, Bacteria

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5207..6040
-----------------
DNA (834bp)
protein (278aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YUC5_BRAFL
hypothetical protein Tax=GWC2_OP9X_49_35_curated
hypothetical protein
rifcsplowo2_01_scaffold_10183_10
unknown

Not on your lists

6045..6458
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_11
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6475..8289
-----------------
DNA (1815bp)
protein (605aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EL70_9BACT
ATP-dependent DNA helicase
Tax=BJP_08E140C01_Syntrophobacterales_43_19
rifcsplowo2_01_scaffold_10183_12
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

8386..9171
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00036035E3
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase Tax=RBG_13_Nitrospirae_39_12_curated
PAS domain S-box
rifcsplowo2_01_scaffold_10183_13
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(9172..9672)
-----------------
DNA (501bp)
protein (167aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLR6_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT83843.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (stra
rifcsplowo2_01_scaffold_10183_14
CG_Micra_02, Micraarchaeota, Archaea

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comp(9838..10026)
-----------------
DNA (189bp)
protein (63aa)
Tax=CG_Micra_02
rifcsplowo2_01_scaffold_10183_15
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10151..11425)
-----------------
DNA (1275bp)
protein (425aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJ10_ROSCS
hypothetical protein; K09786 hypothetical protein Tax=CG_Delta_07
hypothetical protein
rifcsplowo2_01_scaffold_10183_16
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11526..12854
-----------------
DNA (1329bp)
protein (443aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I {ECO:0000313|EMBL:AEG17628.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AEG17628.1};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanob
Anthranilate synthase component I n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5L1_METSW
rifcsplowo2_01_scaffold_10183_17
unknown

Not on your lists

comp(12851..14305)
-----------------
DNA (1455bp)
protein (485aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_18
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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14443..15003
-----------------
DNA (561bp)
protein (187aa)
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] id=5094735 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II, anthranilate synthase component II {ECO:0000313|EMBL:KKP38250.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KKP38250.1};; TaxID=161
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II (EC:4.1.3.27)
rifcsplowo2_01_scaffold_10183_19
unknown

Not on your lists

comp(15016..15282)
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_20
unknown

Not on your lists

comp(15279..16427)
-----------------
DNA (1149bp)
protein (383aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_21
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

16539..17510
-----------------
DNA (972bp)
protein (324aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; M
Anthranilate phosphoribosyltransferase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD09_METIK
anthranilate phosphoribosyltransferase
rifcsplowo2_01_scaffold_10183_22
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

17531..18247
-----------------
DNA (717bp)
protein (239aa)
indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=CG_Micra_05
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium intestinale URNW RepID=U2PYY6_9CLOT
Indole-3-glycerol phosphate synthase
rifcsplowo2_01_scaffold_10183_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18277..18900
-----------------
DNA (624bp)
protein (208aa)
trpF; phosphoribosylanthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=RBG_16_Euryarchaeota_41_19_curated
trpF; phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SV50_9GAMM
rifcsplowo2_01_scaffold_10183_24
unknown

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comp(18909..19793)
-----------------
DNA (885bp)
protein (295aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_25
unknown

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comp(19796..20749)
-----------------
DNA (954bp)
protein (318aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10183_26
unknown

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comp(20758..21717)
-----------------
DNA (960bp)
protein (320aa)

This feature has no annotations

Displaying 26 items

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