ggKbase home page

rifcsplowo2_01_scaffold_13455

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13455_1
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1824)
-----------------
DNA (1824bp)
protein (608aa)
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative (EC:3.1.7.2)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative n=1 Tax=Ricinus communis RepID=B9S008_RICCO
rifcsplowo2_01_scaffold_13455_2
unknown

Not on your lists

comp(1939..2217)
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13455_3
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(2207..3196)
-----------------
DNA (990bp)
protein (330aa)
isopentenyl-diphosphate delta-isomerase, type 2 (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=CG_Micra_01
isopentenyl pyrophosphate isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=IDI2_PYRFU
rifcsplowo2_01_scaffold_13455_4
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(3445..4170)
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0ZA04_9ZZZZ
Putative uncharacterized protein Tax=CG_Micra_05
rifcsplowo2_01_scaffold_13455_5
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4267..4935
-----------------
DNA (669bp)
protein (223aa)
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 {ECO:0000313|EMBL:AKB37187.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Metha
oxidoreductase FAD/NAD(P)-binding domain-containing protein id=5048324 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
oxidoreductase FAD/NAD(P)-binding domain-containing protein
rifcsplowo2_01_scaffold_13455_6
unknown

Not on your lists

5009..5257
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13455_7
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5348..6970)
-----------------
DNA (1623bp)
protein (541aa)
Phospholipase, patatin family n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCH8_9BACT
hypothetical protein; K07001 NTE family protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
patatin
rifcsplowo2_01_scaffold_13455_8
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7330..7890
-----------------
DNA (561bp)
protein (187aa)
Putative uncharacterized protein HGP-15 n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERB1_9CREN
dsbG; protein-disulfide isomerase Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
dsbG; protein-disulfide isomerase
rifcsplowo2_01_scaffold_13455_9

Not on your lists

comp(7901..8389)
-----------------
DNA (489bp)
protein (163aa)
NUDIX hydrolase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSW2_9BACT id=2609 bin=ACD11 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
NUDIX hydrolase {ECO:0000313|EMBL:EKE16422.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
rifcsplowo2_01_scaffold_13455_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8413..9357)
-----------------
DNA (945bp)
protein (315aa)
Putative uncharacterized protein id=5097940 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKT02735.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
rifcsplowo2_01_scaffold_13455_11
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


9478..9951
-----------------
DNA (474bp)
protein (158aa)
50S ribosomal protein L11 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=RL11_PYRAB
rpl11p; 50S ribosomal protein L17
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Micra_05
rifcsplowo2_01_scaffold_13455_12
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9986..11662
-----------------
DNA (1677bp)
protein (559aa)
Pyrrolo-quinoline quinone n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AQY5_9EURY
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELZ01116.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 109
cell surface protein
rifcsplowo2_01_scaffold_13455_13
unknown

Not on your lists

comp(11767..12669)
-----------------
DNA (903bp)
protein (301aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13455_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12829..13311)
-----------------
DNA (483bp)
protein (161aa)
prolyl-tRNA synthetase Tax=AR17
hypothetical protein id=16494 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
YbaK/prolyl-tRNA synthetase associated region
rifcsplowo2_01_scaffold_13455_15
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(13354..15123)
-----------------
DNA (1770bp)
protein (590aa)
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=CG_Micra_04
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
tba:TERMP_00666 glucosamine--fructose-6-phosphate aminotransferase id=1242755 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
rifcsplowo2_01_scaffold_13455_16
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

15218..16111
-----------------
DNA (894bp)
protein (298aa)
Uncharacterized protein Tax=CG_Micra_03
Putative uncharacterized protein id=3524323 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_01_scaffold_13455_17
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

16143..17126
-----------------
DNA (984bp)
protein (328aa)
Methyltransferase type 11 n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RDD9_METP4
type 11 methyltransferase Tax=CG_Micra_05
type 11 methyltransferase
rifcsplowo2_01_scaffold_13455_18
unknown

Not on your lists

comp(17589..18047)
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13455_19
unknown

Not on your lists

comp(18070..18741)
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

Displaying 19 items

View Taxonomy