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rifcsplowo2_01_scaffold_13543

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13543_1
CG_Micra_05, Micraarchaeota, Archaea

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2..1186
-----------------
DNA (1185bp)
protein (395aa)
nucleotidyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=CG_Micra_05
Nucleotidyl transferase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4Y7_METSF
Nucleotidyl transferase
rifcsplowo2_01_scaffold_13543_2
unknown

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comp(1183..2799)
-----------------
DNA (1617bp)
protein (539aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13543_3
unknown

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2938..4917
-----------------
DNA (1980bp)
protein (660aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13543_4
CG_Micra_05, Micraarchaeota, Archaea

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5457..6551
-----------------
DNA (1095bp)
protein (365aa)
Protein-export membrane protein SecF n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGM8_9EURY
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=CG_Micra_05
preprotein translocase subunit SecF
rifcsplowo2_01_scaffold_13543_5
CG_Micra_05, Micraarchaeota, Archaea

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6556..8247
-----------------
DNA (1692bp)
protein (564aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGM7_9EURY
SecD-like protein-export membrane protein; K03072 preprotein translocase subunit SecD Tax=CG_Micra_05
SecD-like protein-export membrane protein
rifcsplowo2_01_scaffold_13543_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(8291..8917)
-----------------
DNA (627bp)
protein (209aa)
Phosphoribosyltransferase n=1 Tax=uncultured bacterium RepID=K1YY50_9BACT
phosphoribosyl transferase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
phosphoribosyltransferase
rifcsplowo2_01_scaffold_13543_7
CG_Micra_01, Micraarchaeota, Archaea

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comp(9014..9286)
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTC0_METAC
hypothetical protein Tax=CG_Micra_01
hypothetical protein
rifcsplowo2_01_scaffold_13543_8
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(9503..10459)
-----------------
DNA (957bp)
protein (319aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=583356 species="Archaea; Cren
Threonine--tRNA ligase n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SQK9_IGNAA
threonyl-tRNA synthetase
rifcsplowo2_01_scaffold_13543_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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10580..11554
-----------------
DNA (975bp)
protein (325aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsplowo2_01_scaffold_13543_10
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11578..12588)
-----------------
DNA (1011bp)
protein (337aa)
Conserved protein n=2 Tax=Methanosarcina mazei RepID=Q8PWB3_METMA
hypothetical protein
Conserved protein {ECO:0000313|EMBL:AAM31372.1}; TaxID=192952 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (s
rifcsplowo2_01_scaffold_13543_11
CG_Micra_05, Micraarchaeota, Archaea

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comp(12585..14105)
-----------------
DNA (1521bp)
protein (507aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14) Tax=CG_Micra_05
Glycyl-tRNA synthetase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KN73_9ARCH
putative glycine--tRNA ligase
rifcsplowo2_01_scaffold_13543_12
unknown

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14245..14460
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13543_13
unknown

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14406..14801
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13543_14
unknown

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14962..15036
-----------------
DNA (75bp)
protein (25aa)

This feature has no annotations

Displaying 14 items

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