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rifcsplowo2_01_scaffold_17550

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_17550_1
unknown

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1..87
-----------------
DNA (87bp)
protein (29aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17550_2
CG_Woesearch_02, Woesearchaeota, Archaea

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591..1244
-----------------
DNA (654bp)
protein (218aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=CG_Woesearch_02
N-glycosylase/DNA lyase (EC:4.2.99.18)
Probable N-glycosylase/DNA lyase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRP6_ARCVS
rifcsplowo2_01_scaffold_17550_3
unknown

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comp(1247..1618)
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17550_4
CG_Micra_03, Micraarchaeota, Archaea

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comp(1615..4011)
-----------------
DNA (2397bp)
protein (799aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Micra_03
threonyl-tRNA synthetase n=3 Tax=cellular organisms RepID=UPI00035E6FAA
threonyl-tRNA synthetase
rifcsplowo2_01_scaffold_17550_5
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4021..5202)
-----------------
DNA (1182bp)
protein (394aa)
pyridoxal phosphate-dependent acyltransferase (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase-like enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T811_9EURY
7-keto-8-aminopelargonate synthetase-like enzyme {ECO:0000313|EMBL:EMR74954.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon S
rifcsplowo2_01_scaffold_17550_6
Halobacillus halophilus, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5213..6241)
-----------------
DNA (1029bp)
protein (343aa)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=866895 species="Bact
L-threonine 3-dehydrogenase n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JMU1_HALH3
rifcsplowo2_01_scaffold_17550_7
unknown

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comp(6259..6558)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17550_8
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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7099..7884
-----------------
DNA (786bp)
protein (262aa)
Membrane protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D9R8_9FIRM rbh
Membrane protein {ECO:0000313|EMBL:ERI93083.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
rifcsplowo2_01_scaffold_17550_9
unknown

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8055..8603
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17550_10

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comp(8596..9714)
-----------------
DNA (1119bp)
protein (373aa)
tRNA wybutosine-synthesizing protein 1 {ECO:0000313|EMBL:KHO52583.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Tyw1, RGD1310420, Rsafd1; tRNA-yW synthesizing protein 1 homolog (S. cerevisiae); K15449 tRNA wybutosine-synthesizing protein 1 id=5044663 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Fe-S OXIDOREDUCTASE Wyeosine biosynthesis
Displaying 10 items

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