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rifcsplowo2_01_scaffold_19107

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_19107_1
CG_Micra_05, Micraarchaeota, Archaea

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comp(3..953)
-----------------
DNA (951bp)
protein (317aa)
hypothetical protein ; K01493 dCMP deaminase [EC:3.5.4.12] Tax=CG_Micra_05
hypothetical protein
MG07298.4; hypothetical protein id=5241316 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_19107_2
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(1134..2864)
-----------------
DNA (1731bp)
protein (577aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV
translation initiation factor eaif-5b
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" s
rifcsplowo2_01_scaffold_19107_3
CG_Micra_05, Micraarchaeota, Archaea

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3004..4317
-----------------
DNA (1314bp)
protein (438aa)
RecJ-like exonuclease; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Micra_05
rifcsplowo2_01_scaffold_19107_4

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comp(4318..4554)
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF06756.1}; TaxID=1457970 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_195_B08.;"
ferredoxin; K05337 ferredoxin id=5048736 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_19107_5

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4846..5322
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380E9B4
Transposase {ECO:0000313|EMBL:EQD49712.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase IS200-family protein
rifcsplowo2_01_scaffold_19107_6

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5600..7033
-----------------
DNA (1434bp)
protein (478aa)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1457970 spec
Probable cytosol aminopeptidase id=4003318 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
leucyl aminopeptidase
rifcsplowo2_01_scaffold_19107_7
unknown

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comp(7036..8397)
-----------------
DNA (1362bp)
protein (454aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19107_8
CG_Micra_01, Micraarchaeota, Archaea

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comp(8465..9085)
-----------------
DNA (621bp)
protein (207aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=CG_Micra_01
CDP-alcohol phosphatidyltransferase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BXZ0_METCG
CDP-alcohol phosphatidyltransferase
rifcsplowo2_01_scaffold_19107_9
unknown

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comp(9122..10003)
-----------------
DNA (882bp)
protein (294aa)

This feature has no annotations

rifcsplowo2_01_scaffold_19107_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(10075..11163)
-----------------
DNA (1089bp)
protein (363aa)
Inositol-3-phosphate synthase {ECO:0000313|EMBL:CDI05248.1}; EC=5.5.1.4 {ECO:0000313|EMBL:CDI05248.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarch
Inositol-3-phosphate synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS51_9ARCH rbh
myo-inositol-1-phosphate synthase
rifcsplowo2_01_scaffold_19107_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(11320..11931)
-----------------
DNA (612bp)
protein (204aa)
cation efflux protein id=14425211 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
cation efflux protein Tax=CSP1_2_Dadabacteria
cation diffusion facilitator family transporter
rifcsplowo2_01_scaffold_19107_12
AR5, Aenigmarchaeota, DPANN, Archaea

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12053..12874
-----------------
DNA (822bp)
protein (274aa)
LAGLIDADG endonuclease
id=18248448 bin=AR5_curated_draft tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
rifcsplowo2_01_scaffold_19107_13
Anoxybacillus flavithermus, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12875..13486)
-----------------
DNA (612bp)
protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=491915 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" sourc
Superoxide dismutase n=2 Tax=Anoxybacillus flavithermus RepID=M5JBP5_9BACI
sodA; Superoxide dismutase
rifcsplowo2_01_scaffold_19107_14

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comp(13499..13939)
-----------------
DNA (441bp)
protein (147aa)
thiol-specific antioxidant protein id=18248451 bin=AR5_curated_draft species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Thiol-specific antioxidant protein {ECO:0000313|EMBL:KHO48454.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
thiolspecific antioxidant protein
rifcsplowo2_01_scaffold_19107_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13936..14205)
-----------------
DNA (270bp)
protein (90aa)
MIP family channel protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LG74_9BACT
tonoplast intrinsic protein (Aquaporin)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 15 items

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