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rifcsplowo2_01_scaffold_42059

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_42059_1
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

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59..493
-----------------
DNA (435bp)
protein (145aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=GWA2_Elusimicrobia_62_23_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=1725381 bin=GWB2_Elusimicrobia_63_16 species=Nocardioidaceae bacterium Broad-1 genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
rifcsplowo2_01_scaffold_42059_2
unknown

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545..661
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

rifcsplowo2_01_scaffold_42059_3
unknown

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comp(720..1208)
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

rifcsplowo2_01_scaffold_42059_4
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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comp(1259..1879)
-----------------
DNA (621bp)
protein (207aa)
dTMP kinase (EC:2.7.4.9)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=5241644 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative thymidylate kinase {ECO:0000313|EMBL:KKP27107.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
rifcsplowo2_01_scaffold_42059_5
unknown

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1982..2395
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsplowo2_01_scaffold_42059_6
unknown

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comp(2401..3258)
-----------------
DNA (858bp)
protein (286aa)

This feature has no annotations

rifcsplowo2_01_scaffold_42059_7
unknown

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comp(3320..3457)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsplowo2_01_scaffold_42059_8
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3530..4000
-----------------
DNA (471bp)
protein (157aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAH2_GEOLS
multi-sensor hybrid histidine kinase Tax=RBG_16_Deltaproteobacteria_49_23_curated
atoC; sigma-54 dependent response regulator atoC
rifcsplowo2_01_scaffold_42059_9
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3991..4308)
-----------------
DNA (318bp)
protein (106aa)
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor Tax=AR11
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit M
rifcsplowo2_01_scaffold_42059_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4357..5076)
-----------------
DNA (720bp)
protein (240aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=CG_Woesearch_02
hypothetical protein
Peptidase S26B, eukaryotic signal peptidase id=5799718 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_42059_11
CG_Woesearch_02, Woesearchaeota, Archaea

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5152..5601
-----------------
DNA (450bp)
protein (150aa)
NMD3-related protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=CG_Woesearch_02
Predicted nonsense mediated mRNA decay protein id=5800424 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
NMD3 family protein
Displaying 11 items

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