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rifcsplowo2_01_scaffold_9987

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9987_1
AR15, Woesearchaeaota, DPANN, Archaea

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comp(1..726)
-----------------
DNA (726bp)
protein (242aa)
Heavy-metal transporting P-type ATPase id=5800398 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Heavy-metal transporting P-type ATPase Tax=AR15
copper efflux ATPase
rifcsplowo2_01_scaffold_9987_2
R_OD1_Yanofskybacteria_39_10, Yanofskybacteria, Parcubacteria, Bacteria

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comp(731..2512)
-----------------
DNA (1782bp)
protein (594aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_39_10_curated
hypothetical protein id=5045886 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_9987_3

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comp(2566..3123)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN93525.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein id=5800409 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_9987_4
unknown

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comp(3272..3481)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9987_5
CG_Micra_02, Micraarchaeota, Archaea

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comp(3488..3841)
-----------------
DNA (354bp)
protein (118aa)
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=CG_Micra_02
rifcsplowo2_01_scaffold_9987_6
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4007..5326)
-----------------
DNA (1320bp)
protein (440aa)
Glucose-6-phosphate isomerase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VQ46_9EURY
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:ENO12335.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
pgi; Glucose-6-phosphate isomerase
rifcsplowo2_01_scaffold_9987_7
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(5333..6139)
-----------------
DNA (807bp)
protein (269aa)
tal; transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFS7_9EURY rbh
Transaldolase {ECO:0000313|EMBL:EGQ43148.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rifcsplowo2_01_scaffold_9987_8

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comp(6182..7609)
-----------------
DNA (1428bp)
protein (476aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5044939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B (EC:6.3.5.6)
rifcsplowo2_01_scaffold_9987_9

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comp(7606..9012)
-----------------
DNA (1407bp)
protein (469aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO51304.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO51304.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_9987_10

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comp(9009..9296)
-----------------
DNA (288bp)
protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003702958
aspartyl/glutamyl-tRNA amidotransferase subunit C
rifcsplowo2_01_scaffold_9987_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9482..9853)
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036019B4
Blue (Type 1) copper protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_01_scaffold_9987_12
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(9867..10172)
-----------------
DNA (306bp)
protein (102aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
dioxygenase, ferredoxin subunit id=14425696 bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
Rieske (2Fe-2S) protein
rifcsplowo2_01_scaffold_9987_13
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10220..10978
-----------------
DNA (759bp)
protein (253aa)
Membrane protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6J969_9BACL
Membrane protein {ECO:0000313|EMBL:EST13329.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus
hypothetical protein
rifcsplowo2_01_scaffold_9987_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(11021..12325)
-----------------
DNA (1305bp)
protein (435aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_13_Woesearchaeota_36_6_curated
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5044305 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
aspartyl-tRNA synthetase
rifcsplowo2_01_scaffold_9987_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12570..13004
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MN69_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA46823.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
rifcsplowo2_01_scaffold_9987_16
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13028..13777
-----------------
DNA (750bp)
protein (250aa)
DSBA oxidoreductase
DSBA oxidoreductase id=5241602 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DSBA oxidoreductase Tax=AR10
Displaying 16 items

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