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rifcsplowo2_01_scaffold_31238

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_31238_1
unknown

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3..128
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31238_2
CG_Micra_02, Micraarchaeota, Archaea

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comp(129..584)
-----------------
DNA (456bp)
protein (152aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YQS8_9EURY
Transcriptional regulator Tax=CG_Micra_02
Transcriptional regulator
rifcsplowo2_01_scaffold_31238_3
RLO_PLX_64_10, Bacteria

Not on your lists

722..2131
-----------------
DNA (1410bp)
protein (470aa)
glnA; glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Glutamine synthetase n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LPP1_9CHRO
glutamine synthetase
rifcsplowo2_01_scaffold_31238_4
unknown

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comp(2350..2703)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31238_5
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

2834..3136
-----------------
DNA (303bp)
protein (101aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=CG_Micra_02
nucleic acid binding OB-fold tRNA/helicase-type id=18248164 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
nucleic acid binding OB-fold tRNA/helicase-type
rifcsplowo2_01_scaffold_31238_6
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(3185..3895)
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein
id=5240631 Tax=CG_Micra_05
id=5240631 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_31238_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3892..4779)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
hypothetical protein id=5240632 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_31238_8
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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4832..5311
-----------------
DNA (480bp)
protein (160aa)
hydD; hydrogenase/sulfur reductase subunit delta Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
hydD; hydrogenase/sulfur reductase, delta subunit id=85116 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
NADH ubiquinone oxidoreductase 20 kDa subunit
rifcsplowo2_01_scaffold_31238_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5312..6610
-----------------
DNA (1299bp)
protein (433aa)
nickel-dependent hydrogenase large subunit Tax=RBG_16_Micrarchaeota_36_9_curated
Nickel-dependent hydrogenase large subunit id=1889192 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hydrogenase/sulfur reductase, alpha subunit
rifcsplowo2_01_scaffold_31238_10
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(6579..6968)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein
seg Tax=RBG_16_Micrarchaeota_49_10_curated
seg id=5240633 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_31238_11
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6984..14570)
-----------------
DNA (7587bp)
protein (2529aa)
Subtilase-family serine protease with fibronectin type III-like domains n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XE7_METBU
KP-43 peptidase
Subtilase-family serine protease with fibronectin type III-like domains {ECO:0000313|EMBL:ABE51879.1}; Flags: Precursor;; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinal
rifcsplowo2_01_scaffold_31238_12
unknown

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comp(14634..15758)
-----------------
DNA (1125bp)
protein (375aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31238_13
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15709..17529)
-----------------
DNA (1821bp)
protein (607aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IQ87_THEET
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EEU63158.1}; Flags: Precursor;; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteracea
peptidase S8 and S53 subtilisin kexin sedolisin
rifcsplowo2_01_scaffold_31238_14
unknown

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17633..17788
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31238_15
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

17739..18629
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein
alias=gwc1_scaffold_1147_10 Tax=RBG_16_OP11_39_9b_curated
alias=gwc1_scaffold_1147_10 id=14424176 bin=bin11_novelCP species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=bin11_novelCP organism_group=Unknown_CP
rifcsplowo2_01_scaffold_31238_16

Not on your lists

18619..19329
-----------------
DNA (711bp)
protein (237aa)
cytochrome c biogenesis transmembrane protein
cytochrome c biogenesis transmembrane protein id=5240958 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cytochrome c biogenesis transmembrane protein {ECO:0000313|EMBL:AJF59949.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_31238_17
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(19502..19864)
-----------------
DNA (363bp)
protein (121aa)
K+dependent Na+ exchanger-like protein Tax=CG_Micra_01
Na+/Ca+ exchanging protein related; K07301 inner membrane protein id=14427206 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
sodium/calcium exchanger family protein
Displaying 17 items

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