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rifcsplowo2_01_scaffold_31920

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_31920_1
CG_Micra_05, Micraarchaeota, Archaea

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210..779
-----------------
DNA (570bp)
protein (190aa)
Tax=CG_Micra_05
rifcsplowo2_01_scaffold_31920_2
CG_Micra_05, Micraarchaeota, Archaea

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780..1511
-----------------
DNA (732bp)
protein (244aa)
Tax=CG_Micra_05
rifcsplowo2_01_scaffold_31920_3
CG_Micra_01, Micraarchaeota, Archaea

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comp(1516..2757)
-----------------
DNA (1242bp)
protein (414aa)
Beta-lactamase domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI29_9EURY
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor Tax=CG_Micra_01
hypothetical protein
rifcsplowo2_01_scaffold_31920_4

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2820..3224
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2QX44_9ENTE
Kef-type K+ transport systems, predicted NAD-binding component {ECO:0000313|EMBL:AIF06761.1}; TaxID=1457970 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II
TrkA-N domain-containing protein
rifcsplowo2_01_scaffold_31920_5

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3227..3895
-----------------
DNA (669bp)
protein (223aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E869_9FIRM
Marine sediment metagenome DNA, contig: S03H2_S04805 {ECO:0000313|EMBL:GAH58349.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
UBA/THIF-type NAD/FAD binding protein
rifcsplowo2_01_scaffold_31920_6
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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4015..4254
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LUK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67903.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
hypothetical protein
rifcsplowo2_01_scaffold_31920_7
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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4254..4511
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LSA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67902.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
RelE protein
rifcsplowo2_01_scaffold_31920_8
unknown

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4515..4781
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31920_9

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4771..5409
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein MJ0417 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y417_METJA
PHP domain-containing protein {ECO:0000313|EMBL:AIF06759.1}; TaxID=1457970 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_195_B08.;"
hypothetical protein
rifcsplowo2_01_scaffold_31920_10
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(5645..6439)
-----------------
DNA (795bp)
protein (265aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=2 Tax=Pyrococcus furiosus RepID=FEN_PYRFU
flap endonuclease-1
rifcsplowo2_01_scaffold_31920_11
CG_Micra_05, Micraarchaeota, Archaea

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comp(6450..6923)
-----------------
DNA (474bp)
protein (158aa)
Predicted transcriptional regulator n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NF15_METST
XRE family transcriptional regulator; K03627 putative transcription factor Tax=CG_Micra_05
transcriptional regulator
rifcsplowo2_01_scaffold_31920_12
CG_Micra_05, Micraarchaeota, Archaea

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6958..8487
-----------------
DNA (1530bp)
protein (510aa)
Peptidase M50 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIV1_9EURY
serine protease htra related protein Tax=CG_Micra_05
peptidase M50 family
rifcsplowo2_01_scaffold_31920_13
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9224..10276
-----------------
DNA (1053bp)
protein (351aa)
Flagellar biogenesis master sigma-54-dependent transcriptional response regulator n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A5A0_PELCD
fgrM; flagellar biogenesis master sigma-54-dependent transcriptional response regulator
Flagellar biogenesis master sigma-54-dependent transcriptional response regulator {ECO:0000313|EMBL:ABA88457.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales
rifcsplowo2_01_scaffold_31920_14
unknown

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comp(10299..10955)
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31920_15
unknown

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comp(10961..11965)
-----------------
DNA (1005bp)
protein (335aa)

This feature has no annotations

rifcsplowo2_01_scaffold_31920_16
unknown

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12396..12536
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

Displaying 16 items

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