ggKbase home page

rifcsplowo2_01_scaffold_53624

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_53624_1
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

2..214
-----------------
DNA (213bp)
protein (71aa)
Tax=CG_Micra_01
rifcsplowo2_01_scaffold_53624_2
unknown

Not on your lists

252..950
-----------------
DNA (699bp)
protein (233aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53624_3
Lysinibacillus sp. A1, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1048..1503
-----------------
DNA (456bp)
protein (152aa)
Putative HTH-type transcriptional activator HxlR n=1 Tax=Prevotella sp. F0091 RepID=U2J755_9BACT
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:KHK55488.1}; TaxID=1571920 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sp. A1.;"
rifcsplowo2_01_scaffold_53624_4

Not on your lists

comp(1459..2391)
-----------------
DNA (933bp)
protein (311aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1579373 species="Archaea.;" sour
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic id=5799615 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_53624_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2435..3190)
-----------------
DNA (756bp)
protein (252aa)
Conserved protein, tetratricopeptide repeat family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BA67_CLOBO
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:KGN00355.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulin
hypothetical protein
rifcsplowo2_01_scaffold_53624_6
unknown

Not on your lists

3388..4686
-----------------
DNA (1299bp)
protein (433aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53624_7

Not on your lists


4744..6063
-----------------
DNA (1320bp)
protein (440aa)
GTP-binding signal recognition particle SRP54 G-domain n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI21_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1457970 species="Archaea; Euryarchaeota; environmental samples.;" so
signal recognition particle subunit SRP54
rifcsplowo2_01_scaffold_53624_8
unknown

Not on your lists

6171..6896
-----------------
DNA (726bp)
protein (242aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53624_9
unknown

Not on your lists

6983..7297
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53624_10
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

7393..8037
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein Tax=CG_Micra_05
hypothetical protein
hypothetical protein id=5241862 bin=GW2011_AR10_complete species=Candidatus Korarchaeum cryptofilum genus=Candidatus Korarchaeum taxon_order=unknown taxon_class=unknown phylum=Korarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_53624_11

Not on your lists

8038..8631
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein
Putative uncharacterized protein id=5241861 bin=GW2011_AR10_complete species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60852.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_53624_12
unknown

Not on your lists

comp(9546..10109)
-----------------
DNA (564bp)
protein (188aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53624_13
unknown

Not on your lists

comp(10168..10944)
-----------------
DNA (777bp)
protein (259aa)

This feature has no annotations

rifcsplowo2_01_scaffold_53624_14
unknown

Not on your lists

comp(10949..11632)
-----------------
DNA (684bp)
protein (228aa)

This feature has no annotations

Displaying 14 items

View Taxonomy