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rifcsplowo2_01_scaffold_63375

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_63375_1
unknown

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comp(170..1045)
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

rifcsplowo2_01_scaffold_63375_2

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1156..2094
-----------------
DNA (939bp)
protein (313aa)
Marine sediment metagenome DNA, contig: S01H1_L05969 {ECO:0000313|EMBL:GAF69391.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
MscS Mechanosensitive ion channel id=5093976 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
mechanosensitive ion channel protein MscS
rifcsplowo2_01_scaffold_63375_3
unknown

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comp(2216..2788)
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsplowo2_01_scaffold_63375_4
unknown

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comp(2789..3166)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

rifcsplowo2_01_scaffold_63375_5
unknown

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3233..3568
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsplowo2_01_scaffold_63375_6

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comp(3558..4253)
-----------------
DNA (696bp)
protein (232aa)
high-affinity nickel-transporter id=5045818 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
High-affinity nickel-transporter {ECO:0000313|EMBL:KHO46431.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
protein UreH
rifcsplowo2_01_scaffold_63375_7

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comp(4338..5069)
-----------------
DNA (732bp)
protein (244aa)
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO51360.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
transcriptional regulator TrmB
transcriptional regulator TrmB id=5241641 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_63375_8
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Berkelbacteria, Bacteria

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5180..5887
-----------------
DNA (708bp)
protein (236aa)
Putative methyltransferase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YUQ4_9PSEU
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Berkelbacteria_50_28_curated
putative methyltransferase
rifcsplowo2_01_scaffold_63375_9
RIFOXYC1_FULL_RIF_OD1_06_38_18_curated, RIF-OD1-6, Parcubacteria, Bacteria

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5888..7246
-----------------
DNA (1359bp)
protein (453aa)
Adenine permease n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LIZ8_9GAMM
transporter, transmembrane Tax=RIFOXYC1_FULL_RIF_OD1_06_38_18_curated
Xanthine/uracil/vitamin C permease
rifcsplowo2_01_scaffold_63375_10
PER_GWF2_39_17, Peregrinibacteria, Bacteria

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comp(7417..8571)
-----------------
DNA (1155bp)
protein (385aa)
id=5097394 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKR08110.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
rifcsplowo2_01_scaffold_63375_11
CG_Micra_05, Micraarchaeota, Archaea

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comp(8611..9384)
-----------------
DNA (774bp)
protein (258aa)
bacitracin resistance protein BacA; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=CG_Micra_05
undecaprenol kinase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRC5_ACEAZ
rifcsplowo2_01_scaffold_63375_12
CG_Micra_02, Micraarchaeota, Archaea

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9487..10461
-----------------
DNA (975bp)
protein (325aa)
K+-dependent Na+/Ca+ exchanger related-protein; K07301 inner membrane protein Tax=CG_Micra_02
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein id=5084639 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Sodium/calcium exchanger protein
rifcsplowo2_01_scaffold_63375_13

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comp(10496..12289)
-----------------
DNA (1794bp)
protein (598aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1031 RepID=R5AII1_9BACT
Monovalent cation:H+ antiporter-2, CPA2 family {ECO:0000313|EMBL:KHO51145.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
membrane protein of unknown function
rifcsplowo2_01_scaffold_63375_14
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

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comp(12677..13435)
-----------------
DNA (759bp)
protein (253aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HIX6_ACIS0
putative ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AGB04677.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
Displaying 14 items

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