ggKbase home page

rifcsplowo2_01_scaffold_2022_29

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: 22922..23149

Top 3 Functional Annotations

Value Algorithm Source
Putative snRNP Sm-like protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RD61_ARCPA similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 71.0
  • Bit_score: 88
  • Evalue 3.50e-15
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein Tax=CG_Micra_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 72.0
  • Bit_score: 111
  • Evalue 7.00e-22
Sm ribonucleoprotein-like protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 71.0
  • Bit_score: 88
  • Evalue 9.80e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Micra_01 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 228
ATGGCAGACAATAAAAGACCATTTGATTTACTGAATGAGTCACTTAACAATACTGTGATCGTTGGGATGAAAGGGAACTATGAATTTAGAGGAGTTATGGTATCTTATGATATTCATATGAACATTGTCCTTGAGAAAGCAGAGCAACTTGTTAACAGTGAAGTTAAGAAAGGAATGGGAAAGATATTTATTAGGGGAGATTCTGTTACCTACATATCGCCTTCTTAG
PROTEIN sequence
Length: 76
MADNKRPFDLLNESLNNTVIVGMKGNYEFRGVMVSYDIHMNIVLEKAEQLVNSEVKKGMGKIFIRGDSVTYISPS*