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rifcsplowo2_01_scaffold_2022

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2022_1
unknown

Not on your lists

comp(14..598)
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2022_2
unknown

Not on your lists

comp(715..978)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2022_3
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

1096..2133
-----------------
DNA (1038bp)
protein (346aa)
Cdc6-1; K10725 archaeal cell division control protein 6 Tax=CG_Micra_05
archaeal cell division control protein 6
ORC complex protein Cdc6/Orc1; K10725 archaeal cell division control protein 6 id=5241737 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_2022_4
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(2148..2789)
-----------------
DNA (642bp)
protein (214aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=693661 species="
Endonuclease III n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ12_ARCVS
rifcsplowo2_01_scaffold_2022_5
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(2822..3577)
-----------------
DNA (756bp)
protein (252aa)
Isopentenyl phosphate kinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TFR7_9EURY
aspartate/glutamate/uridylate kinase; K06981 Tax=CG_Micra_06
aspartate/glutamate/uridylate kinase 2
rifcsplowo2_01_scaffold_2022_6
unknown

Not on your lists

3757..4545
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2022_7
GWD2_OD1_52_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

4542..5318
-----------------
DNA (777bp)
protein (259aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPJ8_9BACT
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:KKW30501.1}; TaxID=1618989 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_G
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
rifcsplowo2_01_scaffold_2022_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5369..5608
-----------------
DNA (240bp)
protein (80aa)
Glutaredoxin-like protein, YruB-family n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2L6_9CLOT
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EEH96907.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_
glutaredoxin-like protein
rifcsplowo2_01_scaffold_2022_9
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

5649..6029
-----------------
DNA (381bp)
protein (127aa)
Resolvase, Holliday junction-type n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGC4_9EURY
Resolvase, Holliday junction-type Tax=CG_Micra_05
rifcsplowo2_01_scaffold_2022_10
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6064..6813
-----------------
DNA (750bp)
protein (250aa)
Methyltransferase type 12 id=4845858 bin=PER_GWC2_41_7 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
type 12 methyltransferase Tax=RBG_13_Deltaproteobacteria_65_10_curated
methyltransferase family protein
rifcsplowo2_01_scaffold_2022_11
unknown

Not on your lists

6861..7022
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2022_12
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


comp(7039..8004)
-----------------
DNA (966bp)
protein (322aa)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=KAE1_PYRHO
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Micra_05
gcp; DNA-binding/iron metalloprotein/AP endonuclease
rifcsplowo2_01_scaffold_2022_13

Not on your lists

comp(8017..8649)
-----------------
DNA (633bp)
protein (211aa)
Marine sediment metagenome DNA, contig: S03H2_S01781 {ECO:0000313|EMBL:GAH53880.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
CAAX protease self-immunity
CAAX protease self-immunity id=5241403 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_2022_14
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(8615..8794)
-----------------
DNA (180bp)
protein (60aa)
30S ribosomal protein S27ae n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YNZ0_9EURY
30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae Tax=CG_Micra_04
SSU ribosomal protein S27AE
rifcsplowo2_01_scaffold_2022_15
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8891..9244)
-----------------
DNA (354bp)
protein (118aa)
UPI0003D1A27A related cluster n=1 Tax=unknown RepID=UPI0003D1A27A
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobu
rps24e; 30S ribosomal protein S24e
rifcsplowo2_01_scaffold_2022_16
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


comp(9260..9652)
-----------------
DNA (393bp)
protein (131aa)
Translation initiation factor 5A n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGL3_9EURY
translation initiation factor eIF-5A Tax=CG_Micra_05
translation initiation factor eIF-5A
rifcsplowo2_01_scaffold_2022_17
unknown

Not on your lists

comp(9795..11264)
-----------------
DNA (1470bp)
protein (490aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2022_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11508..12170
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein
hypothetical protein; K06930 id=5241300 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K06930 Tax=AR10
rifcsplowo2_01_scaffold_2022_19
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

12261..13868
-----------------
DNA (1608bp)
protein (536aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU12788.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
Uncharacterized protein id=5095377 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_2022_20
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

13962..15974
-----------------
DNA (2013bp)
protein (671aa)
hypothetical protein Tax=CG_Micra_05
id=3166717 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
rifcsplowo2_01_scaffold_2022_21
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(16389..17138)
-----------------
DNA (750bp)
protein (250aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F593_9BACT
Uncharacterized protein Tax=CG_Micra_05
rifcsplowo2_01_scaffold_2022_22
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(17140..17910)
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G950_9BACT
Uncharacterized protein Tax=CG_Micra_05
rifcsplowo2_01_scaffold_2022_23
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(17954..18718)
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein Tax=CG_Micra_05
Uncharacterized protein id=5093947 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
rifcsplowo2_01_scaffold_2022_24
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(18715..19542)
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FAP0_9BACT
Uncharacterized protein Tax=CG_Micra_05
rifcsplowo2_01_scaffold_2022_25
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

comp(19515..21113)
-----------------
DNA (1599bp)
protein (533aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G950_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU12788.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
rifcsplowo2_01_scaffold_2022_26
unknown

Not on your lists

comp(21177..21638)
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2022_27
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

21667..22368
-----------------
DNA (702bp)
protein (234aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Micra_05
Hydrolase, TatD family n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TC04_METSL
TatD family hydrolase
rifcsplowo2_01_scaffold_2022_28
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

22378..22851
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX26_METFV
hypothetical protein Tax=CG_Micra_05
hypothetical protein
rifcsplowo2_01_scaffold_2022_29
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

22922..23149
-----------------
DNA (228bp)
protein (76aa)
Putative snRNP Sm-like protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RD61_ARCPA
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein Tax=CG_Micra_01
Sm ribonucleoprotein-like protein
rifcsplowo2_01_scaffold_2022_30
unknown

Not on your lists

23362..23589
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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