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rifcsplowo2_01_scaffold_4556_8

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: comp(5409..6002)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RS4_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 156.0
  • Bit_score: 163
  • Evalue 1.70e-37
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Micra_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 183.0
  • Bit_score: 177
  • Evalue 2.10e-41
rps4p; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 156.0
  • Bit_score: 163
  • Evalue 4.80e-38

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Taxonomy

CG_Micra_05 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 594
ATGGGAGATCCACCAAAACTAAGAAACAAGTATTCTCGTCCGCAGCGATTATGGGATGTTGACAGACTCAAAAATGAAAAAGGACTTAAGCGCGAATTTGGTCTTAAAAATATGCGAGAGTTGTGGATGACTGAAACACAATTAAAAAAATATAGAAGAGAAGCTAGAAGATTATTAGCTCTTACACAAGAGGAGCGGGAAAATAGTGAACAAAAAGTACTATCAAAGCTTGTTAAATTAGGAGTGCTGAAGGATGGTGCTTCACTTGATGATGTGCTATCATTATCTGTACGCGATTTTCTTGAAAGACGGCTTCAAACTATTGTTAAAAGGAAGGACATGGCAAGAACAATGGTGCAAAGTAGGCAACTTATTACTCATGGTTTCATTTCAGTGAACGATCAAAGAGTTTCAGTACCAAGTTATCTTGTTGATGCAAAAACGGAGGGATCAATTTCCTATGCAAAAAAAATAGATATTGAGCCTCCAACAGCTCCTCAAGATGAAAAGAAAGCAGAATCTACCTCTAACGAATCTAAAGAAAATAAACCTGATACTAATGAACCAGGTGAAAATGAAAAACAGGTGGAATAA
PROTEIN sequence
Length: 198
MGDPPKLRNKYSRPQRLWDVDRLKNEKGLKREFGLKNMRELWMTETQLKKYRREARRLLALTQEERENSEQKVLSKLVKLGVLKDGASLDDVLSLSVRDFLERRLQTIVKRKDMARTMVQSRQLITHGFISVNDQRVSVPSYLVDAKTEGSISYAKKIDIEPPTAPQDEKKAESTSNESKENKPDTNEPGENEKQVE*