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rifcsplowo2_01_scaffold_4556_18

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: comp(15560..16393)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 278.0
  • Bit_score: 202
  • Evalue 8.60e-49
Probable tRNA pseudouridine synthase B n=2 Tax=Caldivirga maquilingensis RepID=A8MA72_CALMQ similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 278.0
  • Bit_score: 202
  • Evalue 6.10e-49
H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 278.0
  • Bit_score: 202
  • Evalue 1.70e-49

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Taxonomy

Caldivirga maquilingensis → Caldivirga → Thermoproteales → Thermoprotei → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 834
ATGCCCTTGGACGGATTTTTAATAATCGACAAACCCCCTAAGGTTATTTCGCATGAACTTACTACCTGGTTAAAAAAATTATTGAAAGTTAAAACGGGTCATGCTGGAACTCTTGATCCGGATGTTACTGGTGTTTTCCCGGTTGCATTAGGCAAATCGACAAAACTTCTCCAATATATTTCTTCGAATGATAAGACCTATATCGGAATTATAAAATTCAAGAATAAACAAATCGATGATTCTGAAATTAAAAATCTATTTAGTGAGTTTACTGGGAAAATTTGGCAGGTTCCACCTACAATGAGTGCAGTAAAAAAAGTTAAGCGAAAAAGAACTGTTTATTCGCTCGATTTTCTTGAAAGAGACGGACCATTTGTTTTATTTAAAACTAAAGTTGAAGCTGGGACTTATATTCGAACCTTATGCGAAGATATTGGAAAAAAATGTGGAGGAGCTAGAATGGAGGAACTAAGAAGAATTGCTGTTGGTGATATAAATGAAAAACAAGCAATAAAACTCCACAAACTTGTTGATTTTTGTAAATCAGGTAAACTACAAGAGATAATCATCCCACCAGATTCTCTTATAAAATTTCCTAAAGTTGAGATAAATAAGCACACGATCGAACCTCTTCTAAATGGTGCTACTATAACTAAATATGGAATAGTGAAGTGTGAACGTTTTGGAGTTGAAGAACTAGTTTCAGTTTATTACAACAATACATTTGTTGGAGTTGGGTTATCCTTAGTAAGATCAAAAGAAATAGACACAATGAAAAGTGGTTTTGTAATTAAAATGAAAAGAACACATGTTACTAAATCTCAACTACTTTAA
PROTEIN sequence
Length: 278
MPLDGFLIIDKPPKVISHELTTWLKKLLKVKTGHAGTLDPDVTGVFPVALGKSTKLLQYISSNDKTYIGIIKFKNKQIDDSEIKNLFSEFTGKIWQVPPTMSAVKKVKRKRTVYSLDFLERDGPFVLFKTKVEAGTYIRTLCEDIGKKCGGARMEELRRIAVGDINEKQAIKLHKLVDFCKSGKLQEIIIPPDSLIKFPKVEINKHTIEPLLNGATITKYGIVKCERFGVEELVSVYYNNTFVGVGLSLVRSKEIDTMKSGFVIKMKRTHVTKSQLL*