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rifcsplowo2_01_scaffold_13670_11

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: comp(10326..14231)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II, large subunit DP2 (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 999.99
  • Bit_score: 1010
  • Evalue 5.60e-292
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=573063 species="Archaea; Euryar similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 999.99
  • Bit_score: 1010
  • Evalue 2.80e-291
DNA polymerase II large subunit n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTT0_METIM similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 999.99
  • Bit_score: 1010
  • Evalue 2.00e-291
  • rbh

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Taxonomy

Methanocaldococcus infernus → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3906
ATGGATTCAAAAGAATATTTCCAAGAATTAAGAAAAATGCTTGAAAATGCTTATTCAATAGCAACAGAAGCCAGAAAAAAAGGATTGGATCCGGTAACCGAAGTTGAGATTAAGATTACAACTGATGTTGCTGCACGTGTTGAGGGAATTGTAGGGCCAGAAGGGATATCAAAAATCATAAGGGAGTTAGAATCTGGAGGTATGCAAAGAGAAACAATTGCATTTGAAATTGCAAAAAAAATAGTACGTGGGGAAACATCAAAAAAAGGAACAACCGAAGAACTCATTGAACAGGCAGTAAGAACCGGAGTAGGAATTTTAACTGAAGGAGTGCTTGTTGCACCTACTGAAGGAATATCAAAAGTTAAAATAAATGAAAACCCGGACGGAAGTAATTATGTTGCTGTTTATTTTTCAGGGCCAATAAGAAGTGCTGGAGGAACTGCTGCTGCATTAAGCGTTGTTTTAGCAGATGTTGCAAGAAGAGAAGCAAAAGTTGGTGACTATAGAACAACAGATACACAAATAGAAAGGTATGTAGAAGAGGTAAATACATATGAGGCAAGATGCGTACATCTGCAATACAAACCTTCAGATGCAGATGTGAGACATGTAGTAATGAATTGCCCTGTTTGCATAAATGGTGAACCAACTGAAGAAGTAGAGGTATCTGCTTATCGTGATGTTCCAGGAGTGGAAACAAATAGAGTAAGAGGAGGAGTTCCCCTAGTTCTTTGCGAGGGAATTGCACAAAAAGCAGCGAAAGTTTTGAAATATACAAAAAAATTGGAATTGGATTGGGATTGGCTTGAGAAGATAATAAAAATAAAGAAAAAAGAGGATAAGATAGAAATTAAGCCGGATGATAGTTATTTAGAGGGCTTGGTTGCAGGAAGACCTGTATTTTCATATCCTTCAAGAAAAGGTGGGTTTAGATTAAGATATGGGAAGAGCAGAACAAATGGAATTATGGCAAAAAATATCCATCCTGCAACAATGATTTTAACTGATGAATTTCTTGCATATGGCACACATATGAAAATAGAAAGGCCTGGAAAAGGATGTGTGGTTTCTGGTAATGAGAACCTTGAACCGCCAATGGTTAAACTGAAGAAGGGAGATGTTATAAAAGTACATACAATTGAACAGGCTGAAGAGATAAAAAACAAAATCGAGAGTATCCTGTTCCTTGGGGATATGCTTGTAACATATGGGGATTTTCTAAAATCAAACCATCCACTTGTGCCTGGTGCCTGGTGTTATGAATGGTTTGCACAACTTGCAGAAAAAAAAGGCGCAATAGTCGAAGAAAACATGAAAGCAAAGGAAGCTTTTGAAGTATGCAGAAAATATGAATTGCCATTGCATCCTTCATTTACATATAATTGGAATGAGATAACAATTGAAGAACTTAAGAGCATAAGAGAGTTGTTTTTTGAAGCTGAAAAAGAAGAAGAAAACGGCAGAATTAGTAGAGTAAAGGTAAAGAATTCAAAAGAAAAGGAGATACTTGAAAAACTATTAGTTGAACACAAGGTTGAAGATGGCAAAGTAGTGATTAATGGTGAGGATGGATTTGCATTATTAGCAACATTGAATGTGCTTGATAAAAAAGAAATAACATATGTAGGGGATATACTGGAGATACTGCACGAACTGGCAGGAGTAGTAATTAAACCAAAAATGCCAACCTATATTGGAGCAAGAATGGGAAGACCAGAAAAAGCAAAGGAAAGAAAGATGGATGGCAGCCCAAATGTATTGTACCCAACTGGATCTCAAAATAGAAGCATAACAAAAATATATAAGACACTAAAAAGCAGGGGTATTGAGAGCACGATCAATTTAGAGCTTGGGAGATTTAGGTGCTCAAATTGCAAAGCCATAAGTTTCCAGAAAAAATGTGAAAAATGTGGTGGACTAGCGAATATTGAAAAAATGTGCATAGTCTGCAAAAAACCAGTTAACAGTGATATACACTGTGACAAAAAAACTTCAACATTTGATAAAAGACCAATAAAAATAGTAGAGATAATTGATTCAATAAAAAAAGATTTACAAATAAATGTTGATGAACTGAAAGGAGTAAAAGGATTATCAAATCCAAACAGAGTTCCAGAAAGACTTGAAAAGGGATTTATAAGGGCTAAAAATGAGGTATATATCTTTAGGGATGGAACCTGCAGATTTGATGCAACAGACATACCACTTACTCATTTTTTTCCTGATGAAATTGGGTTAAGTGTTTCAAAGGCAAGGGAGCTTGGGTATGATAAAGATTATTTGTCAAAACCATTAACAGATGGAAGCCAGTTAGTTCCATTAAAACATCAGGATATAGTTCTAGCAAATAGTGGCGCAGAATATTTTATAAGAGTTGCAAGGTTCATCGATGAAATGCTTGTTGATTTATATAAGATAAGACCATATTACAAGGTTTCAGAAAAAAAAGATTTGATAGGGCATTTGTGCATTGGTTTGTCTCCCCACACATCTGCTGGAGTTATTTGTAGAATTATTGGGATTACAAAGGCAAACGTTGGCTATGGCCATCCTTATTTTCATACTGCAAAAAGGAGGAATTGCTTTTATCCAAACACAAGAATTGAGATAACTAATGCTAGTAAGCCAGCCCCAGAAGGTTCTGCTGCCACTTTCGAAATGATTTTTGAAGATTTAGAAACGATTGTAGAAAAACTCATTAAGGGTAATACAAAAAAAGTAAAAAGACTGGATGACGCAACAATAAAAGTAGAGATGGACGAAGAATTATATGTTACTAGTTTAGATCCTAAAACATTCAAAATTATCCAAAGAAAAATAAAATGTTTTATAAAAACAAAAGCGCCTGAGTATTGGGTTAGGATAAAAACAGAACATGGAAAAGAAATGGTTGTAACTCCAGATCACAATGTCCTTTGTATCAAAAACAAAAAGCTAAAGGCAATTGAAGCACAACATGTAAAGGAGGGAATGTTTGTTCCGGTTGAAAAAAGCTCTGGTTCAAAAGCGCTCCCTTCAACAATAAATGAAGAGAAAATAATTAAGATTGAAAAAGTAAATGAAGACAAACCAGCTTATTGTTTAGATATTGAAACTGAAACAGATGAATTGATTGAAAAGAATGTTTTACTTGATAACGGAATTTTTTGCATACGTTGTGATGGTGACGAGGATTGCGTAATGCTTTTGATGGACGGGCTTATTAATTTCTCAAAAGAATTCTTAACTGATAGGATTGGAGGGACAATGGATACGCCGCTTGTTTTAACCCCTGCAATTGATCCAAAAGAAGTTGATGATGAAGCACACAGCATTGAATTTGTGGATAGGTATCCACTAGAGTTATATGAAGCCTCGGAAAAGATCACTCCTCCTGGAAAAATAAAAATCAAAACAGTAAAGGATGTGCTTGGAGAAGAAGAACAATATGGGAACTTTCCATTAACTGTTTTAGGAGGTTATCTTGACAAGGGGCCAACAAAAACAAGATATGTAACTCTTGGATCAATACCAGAAAAAATAGAAGCTGAATTTAGGCTTCATGAACTGATAAATGCAGTTGATCTGAAGAATACTGCAGAAAGACTTATTCTCAGCCATTTTATACCAGACCTGTATGGTAACTTGCGATCTTATTCACGTCAAACATTCAGGTGTGTAAGCTGTAATACCATTTATAGAAGGGTCCCACTCGCTGGCAAGTGCATAAAATGTGGTGGAAACTTATTGCTTACAATAAATAAAGGGGGAATACAAAAATATCTTGAAATATCAAAGAACATGGCTGTTAAGTATGATCTTCCACTTTACCTAAAACAAAGACTTGATTTGGTCGAAAAGGAAATCAAAAGCATATTTGAAGATGACAAGATTAAACAGATGGGACTTGCTGACTTCATGTAG
PROTEIN sequence
Length: 1302
MDSKEYFQELRKMLENAYSIATEARKKGLDPVTEVEIKITTDVAARVEGIVGPEGISKIIRELESGGMQRETIAFEIAKKIVRGETSKKGTTEELIEQAVRTGVGILTEGVLVAPTEGISKVKINENPDGSNYVAVYFSGPIRSAGGTAAALSVVLADVARREAKVGDYRTTDTQIERYVEEVNTYEARCVHLQYKPSDADVRHVVMNCPVCINGEPTEEVEVSAYRDVPGVETNRVRGGVPLVLCEGIAQKAAKVLKYTKKLELDWDWLEKIIKIKKKEDKIEIKPDDSYLEGLVAGRPVFSYPSRKGGFRLRYGKSRTNGIMAKNIHPATMILTDEFLAYGTHMKIERPGKGCVVSGNENLEPPMVKLKKGDVIKVHTIEQAEEIKNKIESILFLGDMLVTYGDFLKSNHPLVPGAWCYEWFAQLAEKKGAIVEENMKAKEAFEVCRKYELPLHPSFTYNWNEITIEELKSIRELFFEAEKEEENGRISRVKVKNSKEKEILEKLLVEHKVEDGKVVINGEDGFALLATLNVLDKKEITYVGDILEILHELAGVVIKPKMPTYIGARMGRPEKAKERKMDGSPNVLYPTGSQNRSITKIYKTLKSRGIESTINLELGRFRCSNCKAISFQKKCEKCGGLANIEKMCIVCKKPVNSDIHCDKKTSTFDKRPIKIVEIIDSIKKDLQINVDELKGVKGLSNPNRVPERLEKGFIRAKNEVYIFRDGTCRFDATDIPLTHFFPDEIGLSVSKARELGYDKDYLSKPLTDGSQLVPLKHQDIVLANSGAEYFIRVARFIDEMLVDLYKIRPYYKVSEKKDLIGHLCIGLSPHTSAGVICRIIGITKANVGYGHPYFHTAKRRNCFYPNTRIEITNASKPAPEGSAATFEMIFEDLETIVEKLIKGNTKKVKRLDDATIKVEMDEELYVTSLDPKTFKIIQRKIKCFIKTKAPEYWVRIKTEHGKEMVVTPDHNVLCIKNKKLKAIEAQHVKEGMFVPVEKSSGSKALPSTINEEKIIKIEKVNEDKPAYCLDIETETDELIEKNVLLDNGIFCIRCDGDEDCVMLLMDGLINFSKEFLTDRIGGTMDTPLVLTPAIDPKEVDDEAHSIEFVDRYPLELYEASEKITPPGKIKIKTVKDVLGEEEQYGNFPLTVLGGYLDKGPTKTRYVTLGSIPEKIEAEFRLHELINAVDLKNTAERLILSHFIPDLYGNLRSYSRQTFRCVSCNTIYRRVPLAGKCIKCGGNLLLTINKGGIQKYLEISKNMAVKYDLPLYLKQRLDLVEKEIKSIFEDDKIKQMGLADFM*