ggKbase home page

rifcsplowo2_01_scaffold_13893_16

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: 11728..13083

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 455.0
  • Bit_score: 241
  • Evalue 5.50e-61
Shikimate dehydrogenase n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LM24_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 456.0
  • Bit_score: 342
  • Evalue 4.70e-91
Shikimate dehydrogenase {ECO:0000313|EMBL:EQB65619.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 456.0
  • Bit_score: 342
  • Evalue 6.60e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermoplasmatales archaeon I-plasma → Thermoplasmatales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1356
ATGTTAAACCAAAAAACTAGCATATATTGCGTAATTGGCGATCCAGTAAAGCACTCTCTTTCTCCATTAATGCACAATGCTTTATTCCAGGCGTTAGGCATAGATGCAGTCTACACCAAGTTTCATGTTAAAAAAGAAGAACTTAAAGATGCAACTGATCTCTTTAGAAAATTTGGAATAAAAGGCATCAATGTTACAATCCCCCACAAAACTGAGATAATGAAATATTTGGATGAAATTGACAAAACTGCGAAATTAGTTGGCGCAGTTAATACAATAGTGAATAAGAATGGAAAATTAATTGGTTATAATACTGATTTTTATGGAGTTGAATCATTGCTTGGGCCATTTTTTTCTAAATTAAAAAATAAAACAGCAATTATTTTAGGAGCTGGCGGAGTAGCGCGTGCAGTTGCATTCGTACTTGCAAAAAATGGATTGGACTTCATTATTCTAAACAGAACTACCAAGAATGCAGAAAAACTTGTAGATATAATAAAAAAACGAAAAAAAGTAAAGATTCAGGTTTATCCTCTCAATAATGCTAGCCTCTCAAAACATCTTGCGTCTGCATCATTACTTTGCAATTGCACTTCAGTTGGTTTACATAACAAAGATAGTCCAGTTCCAAAAAATCTTTTGCACAATAATTTGGTTGTTTTTGATGCCGTTTATTCAAAAAATGGCACTGCGCTTATAAACAATGCAAAAGAAAGAGGATGCAAAACAATTGATGGGAAGCAACTACTTGTTGAACAGGGAGCTAAATCATTTGAAATATGGACTGGAAAGGGGTCAAATAAGAAAAACATGTTTAATGCAATAATTAAAGGACAAGTTAAAGGTAATATTTATTTGGCTGGTTTTATGGGAAGTGGAAAAACTTCTGTAGGTATCAAACTATCAAAGCGCTTGCACAGAAAATTTGTTGATGTTGATGAAGAAATTGCAAAAAAAGCAAAAAAACCAATAGCTCAGATTTTTTTTAATGATGGTGAGAATAAGTTCAGGAAGTATGAGGAAAAGATGATTAATCAGGTCAGTAAGAAATCATCTCAAGTGGTTGCTTTAGGTGGGGGAGTAGTTACAAACTTAATCAATACTTTAAGAATGAAAACAACTGGTACAATAATATCGCTTAAAGCATCTTCTGAATCAATTATTGAACGCACATACAAGAACAACCTGCGTCCTTTACTTAATGGTCTTACAAAGAAACAAAAACTAAAAAAAATAAAGCAACTCTTGTTGGAAAGAAAATTGTTTTATCAATTTGCAAAAGATTTTGAGGTAACAACAGATAACAAAACAATTAAAGAGATAGTTGAGGAGATTATTGGTGAACTAAATGAGTGA
PROTEIN sequence
Length: 452
MLNQKTSIYCVIGDPVKHSLSPLMHNALFQALGIDAVYTKFHVKKEELKDATDLFRKFGIKGINVTIPHKTEIMKYLDEIDKTAKLVGAVNTIVNKNGKLIGYNTDFYGVESLLGPFFSKLKNKTAIILGAGGVARAVAFVLAKNGLDFIILNRTTKNAEKLVDIIKKRKKVKIQVYPLNNASLSKHLASASLLCNCTSVGLHNKDSPVPKNLLHNNLVVFDAVYSKNGTALINNAKERGCKTIDGKQLLVEQGAKSFEIWTGKGSNKKNMFNAIIKGQVKGNIYLAGFMGSGKTSVGIKLSKRLHRKFVDVDEEIAKKAKKPIAQIFFNDGENKFRKYEEKMINQVSKKSSQVVALGGGVVTNLINTLRMKTTGTIISLKASSESIIERTYKNNLRPLLNGLTKKQKLKKIKQLLLERKLFYQFAKDFEVTTDNKTIKEIVEEIIGELNE*