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rifcsplowo2_01_scaffold_13893

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13893_1
unknown

Not on your lists

170..583
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13893_2
unknown

Not on your lists

comp(603..830)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13893_3
unknown

Not on your lists

comp(871..1080)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13893_4
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

1157..3184
-----------------
DNA (2028bp)
protein (676aa)
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=CG_Micra_05
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00036D22DC
rifcsplowo2_01_scaffold_13893_5
unknown

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comp(3181..4077)
-----------------
DNA (897bp)
protein (299aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13893_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(4202..5626)
-----------------
DNA (1425bp)
protein (475aa)
purB; adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=CG_Woesearch_01
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FD55_9DELT rbh
rifcsplowo2_01_scaffold_13893_7
unknown

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5737..6294
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13893_8
CG_Micra_05, Micraarchaeota, Archaea

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6646..7896
-----------------
DNA (1251bp)
protein (417aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=CG_Micra_05
Aspartokinase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7H8_METSW
aspartate kinase
rifcsplowo2_01_scaffold_13893_9
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

7883..8917
-----------------
DNA (1035bp)
protein (345aa)
Asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=CG_Micra_05
Aspartate-semialdehyde dehydrogenase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXS4_FERPA
aspartate-semialdehyde dehydrogenase
rifcsplowo2_01_scaffold_13893_10
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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8981..9754
-----------------
DNA (774bp)
protein (258aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5Z2_METCZ rbh
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
rifcsplowo2_01_scaffold_13893_11
unknown

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9760..9951
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13893_12
unknown

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9954..10142
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13893_13
RBG_16_Archaea_50_20_curated, Archaea

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10166..11092
-----------------
DNA (927bp)
protein (309aa)
3-dehydroquinate synthase; K11646 dehydroquinate synthase II [EC:1.4.1.-] Tax=RBG_16_Archaea_50_20_curated
3-dehydroquinate synthase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL8_METFV
3-dehydroquinate synthase ii
rifcsplowo2_01_scaffold_13893_14
Diospyros kaki, Diospyros, Ericales, asterids, Streptophyta, Viridiplantae

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11093..11440
-----------------
DNA (348bp)
protein (116aa)
3-dehydroquinate dehydratase (EC:1.1.1.25 4.2.1.10)
Dehydroquinate dehydratase/shikimate:NADP oxidoreductase n=1 Tax=Diospyros kaki RepID=C8KH58_DIOKA
Dehydroquinate dehydratase/shikimate:NADP oxidoreductase {ECO:0000313|EMBL:BAI40147.1}; TaxID=35925 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliop
rifcsplowo2_01_scaffold_13893_15
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11451..11747
-----------------
DNA (297bp)
protein (99aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03785 3-dehydroquinate dehydratase I [EC:4.2.1.10] Tax=RBG_13_Deltaproteobacteria_52_11b_curated
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KI40_9ARCH
rifcsplowo2_01_scaffold_13893_16
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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11728..13083
-----------------
DNA (1356bp)
protein (452aa)
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LM24_9EURY
Shikimate dehydrogenase {ECO:0000313|EMBL:EQB65619.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-pl
rifcsplowo2_01_scaffold_13893_17
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

13076..15454
-----------------
DNA (2379bp)
protein (793aa)
Chorismate synthase {ECO:0000256|RuleBase:RU000605}; EC=4.2.3.5 {ECO:0000256|RuleBase:RU000605};; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples
aroA1; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
Chorismate synthase n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MWB2_9EURY
rifcsplowo2_01_scaffold_13893_18
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

15456..16586
-----------------
DNA (1131bp)
protein (377aa)
tyrA; chorismate mutase/prephenate dehydratase (EC:5.4.99.5)
Chorismate mutase/prephenate dehydratase {ECO:0000313|EMBL:AAW40218.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AAW40218.1};; TaxID=243164 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Deh
Chorismate mutase/prephenate dehydratase n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z994_DEHE1
rifcsplowo2_01_scaffold_13893_19
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

16587..17663
-----------------
DNA (1077bp)
protein (359aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:AKG91647.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AKG91647.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Arch
aspartate aminotransferase (EC:2.6.1.1)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JNI1_9FIRM
Displaying 19 items

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