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rifcsplowo2_01_scaffold_20328_7

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: 3899..4606

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4e n=1 Tax=Methanobacterium sp. MB1 RepID=U6EDM5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 232.0
  • Bit_score: 175
  • Evalue 8.90e-41
rps4e; 30S ribosomal protein S4e similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 232.0
  • Bit_score: 175
  • Evalue 1.90e-41
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanoba similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 232.0
  • Bit_score: 175
  • Evalue 9.50e-41

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Taxonomy

Methanobacterium formicicum → Methanobacterium → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 708
ATGGCTAAAAGAGGGGGTACTGCTCATCAAAAAAGACTTGCGATTACAAAAGAAATTCCAATTAACAATAAAAAGGAATACACCTGGATTATAAAACAAGCTCCAGGACCACATCCAAAAAAACATTCAATTCCTTTGCTTGTATTTTTAAGAGAGATGCTAAAGATTGCAAAAACATCAAAAGAAGCAAGTAAAATACTTAATCAGGGAGCTATAAAAATTGACGGTAAGATAAGAAAAAAAGCTGATTTCCCAATAGGCTTTATGGATGTAGTATCATTGAAAACAGGAGAGAATTATCGTATTATTATCGATACTGGCGGAAGGCTTAGACCTGTTCCAATAAATGAAGATCAGGCAAAAACAAAAGTCTTAAAGGTAGTAAAAAAGCATACTGCTCCAAAAGGAAAACACATATTAACATTCCATGATGGAAGAAACTTGATTGGGGATAACAATGTATCTGTAGGGGACAGTGTAATATTTTCTTTAAAAGATTATAAGTTAGCATCATTATTGAAATTAGAAAAAGGATGCAGGTGCCTTATCAGAGAAGGAAAACATGTTGGTGTTATTGCAACATTAAAAGATATACAACCAAGAATTGGAAGACCTGATGAAGCGATAGTAAATACAGAAAAAGAAGAGTTCATTACTGTTGCGAAATATTTATTTGTTGTAGACAAGTCATTTAAAGGTGCATCTTAA
PROTEIN sequence
Length: 236
MAKRGGTAHQKRLAITKEIPINNKKEYTWIIKQAPGPHPKKHSIPLLVFLREMLKIAKTSKEASKILNQGAIKIDGKIRKKADFPIGFMDVVSLKTGENYRIIIDTGGRLRPVPINEDQAKTKVLKVVKKHTAPKGKHILTFHDGRNLIGDNNVSVGDSVIFSLKDYKLASLLKLEKGCRCLIREGKHVGVIATLKDIQPRIGRPDEAIVNTEKEEFITVAKYLFVVDKSFKGAS*