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rifcsplowo2_01_scaffold_4265

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4265_1
unknown

Not on your lists

2..223
-----------------
DNA (222bp)
protein (74aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4265_2
unknown

Not on your lists

275..1918
-----------------
DNA (1644bp)
protein (548aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4265_3
unknown

Not on your lists

1915..2790
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4265_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(2961..3527)
-----------------
DNA (567bp)
protein (189aa)
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
rifcsplowo2_01_scaffold_4265_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3551..3898)
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E07C5
hypothetical protein
RNA polymerase II, Rpb4 Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_4265_6
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(3902..4192)
-----------------
DNA (291bp)
protein (97aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e id=5051516 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=AR18
50S ribosomal protein L21e
rifcsplowo2_01_scaffold_4265_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4328..4597)
-----------------
DNA (270bp)
protein (90aa)
id=5047125 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_4265_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4631..6232)
-----------------
DNA (1602bp)
protein (534aa)
Histone acetyltransferase Elp3 like protein; K07739 elongator complex protein 3 [EC:2.3.1.48] id=5044155 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=CG_Woesearch_02
Histone acetyltransferase Elp3 like protein
rifcsplowo2_01_scaffold_4265_9
unknown

Not on your lists

6278..7177
-----------------
DNA (900bp)
protein (300aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY id=5103042 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Signal peptide peptidase SppA, 36K type n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AES0_9EURY Tax=AR20
Signal peptide peptidase SppA, 36K type
rifcsplowo2_01_scaffold_4265_10
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

7236..7736
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003816AF2
hypothetical protein
Tax=AR20
rifcsplowo2_01_scaffold_4265_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7733..8140
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003707988
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_4265_12
unknown

Not on your lists

8495..9148
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4265_13
unknown

Not on your lists

comp(9151..9489)
-----------------
DNA (339bp)
protein (113aa)
Peptidyl-tRNA hydrolase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BII2_9EURY id=5103578 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidyl-tRNA hydrolase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BII2_9EURY Tax=AR20
Peptidyl-tRNA hydrolase
rifcsplowo2_01_scaffold_4265_14
unknown

Not on your lists

9641..10417
-----------------
DNA (777bp)
protein (259aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4265_15
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10430..11278
-----------------
DNA (849bp)
protein (283aa)
Heat shock protein DnaJ domain protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A7Z1_THEID
heat shock protein DnaJ domain-containing protein Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
heat shock protein DnaJ domain-containing protein
rifcsplowo2_01_scaffold_4265_16
unknown

Not on your lists

comp(11293..12150)
-----------------
DNA (858bp)
protein (286aa)
Predicted GTPase of the OBG/HflX superfamily n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TW38_METKA id=5103555 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Predicted GTPase of the OBG/HflX superfamily n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TW38_METKA Tax=AR20
putative GTPase of the OBG/HflX superfamily
rifcsplowo2_01_scaffold_4265_17
unknown

Not on your lists

12228..12767
-----------------
DNA (540bp)
protein (180aa)
Small-conductance mechanosensitive channel n=2 Tax=Thermococcus RepID=G0HKF9_THES4 id=5103554 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small-conductance mechanosensitive channel n=2 Tax=Thermococcus RepID=G0HKF9_THES4 Tax=AR20
Small-conductance mechanosensitive channel
rifcsplowo2_01_scaffold_4265_18
R_OD1_Kaiserbacteria_49_16, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

12772..13119
-----------------
DNA (348bp)
protein (116aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_16_curated
rifcsplowo2_01_scaffold_4265_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(13112..13357)
-----------------
DNA (246bp)
protein (82aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C3AD8
hypothetical protein Tax=CG_Woesearch_03
rifcsplowo2_01_scaffold_4265_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(13338..13679)
-----------------
DNA (342bp)
protein (114aa)
id=5044649 Tax=CG_Woesearch_03
id=5044649 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_4265_21

Not on your lists

comp(13984..14391)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NusA family KH domain-containing protein
rifcsplowo2_01_scaffold_4265_22

Not on your lists

comp(14414..14662)
-----------------
DNA (249bp)
protein (83aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BD095
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L30e
rifcsplowo2_01_scaffold_4265_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14708..15883)
-----------------
DNA (1176bp)
protein (392aa)
DNA-directed RNA polymerase subunit A'' Tax=AR11
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
rifcsplowo2_01_scaffold_4265_24

Not on your lists

comp(15887..18523)
-----------------
DNA (2637bp)
protein (879aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BE5C7
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_4265_25

Not on your lists

comp(18525..20327)
-----------------
DNA (1803bp)
protein (601aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:KHO52598.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO52598.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR9_METFV id=5103778 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_4265_26
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20329..21813)
-----------------
DNA (1485bp)
protein (495aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=AR17
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E7919
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_4265_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21806..22132)
-----------------
DNA (327bp)
protein (109aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=5044124 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=AR18
DNA-directed RNA polymerase, subunit H
Displaying 27 items

View Taxonomy