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rifcsplowo2_01_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_240_1
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..853)
DNA (852bp) protein (284aa)
Transposase IS4 family protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMX5_METZD
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEH59991.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosals
rifcsplowo2_01_scaffold_240_2
unknown

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989..1246
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsplowo2_01_scaffold_240_3
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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1259..2326
DNA (1068bp) protein (356aa)
Radical SAM domain protein n=7 Tax=Clostridium thermocellum RepID=A3DF12_CLOTH
Radical SAM domain protein Tax=GWA1_OD1_43_15
radical SAM family protein
rifcsplowo2_01_scaffold_240_4
unknown

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2314..2835
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsplowo2_01_scaffold_240_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2842..3438
DNA (597bp) protein (199aa)
phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C4421
phosphoglycerate mutase family protein
rifcsplowo2_01_scaffold_240_6
unknown

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3481..4512
DNA (1032bp) protein (344aa)

This feature has no annotations

rifcsplowo2_01_scaffold_240_7
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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4584..7517
DNA (2934bp) protein (978aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI00037A851F
thrombospondin family protein
Tax=BJP_IG2158_Zixibacteria_48_33
rifcsplowo2_01_scaffold_240_8
GWB2_Elusimicrobia_63_16_curated, Elusimicrobia, Bacteria

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7519..8322
DNA (804bp) protein (268aa)
Putative periplasmic ligand-binding sensor domain protein Tax=GWB2_Elusimicrobia_63_16_curated
Putative periplasmic ligand-binding sensor domain protein id=2250569 bin=GWB2_Elusimicrobia_63_16 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
rifcsplowo2_01_scaffold_240_9
unknown

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comp(8324..8623)
DNA (300bp) protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_240_10
unknown

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comp(8620..9015)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035DE859
Resolvase, Holliday junction-type n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW94_METFV Tax=AR20
Resolvase, Holliday junction-type
rifcsplowo2_01_scaffold_240_11

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comp(9058..10644)
DNA (1587bp) protein (529aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579376 species="Archaea.;" source=
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365A573
hypothetical protein
rifcsplowo2_01_scaffold_240_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(10651..11088)
DNA (438bp) protein (146aa)
hypothetical protein
id=3832836 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=3832836 Tax=CG_Pacearch_01
rifcsplowo2_01_scaffold_240_13

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comp(11085..11651)
DNA (567bp) protein (189aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO45992.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
id=3832835 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_240_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11690..12733)
DNA (1044bp) protein (348aa)
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=5046895 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=AR18
rifcsplowo2_01_scaffold_240_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12771..13892)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C5CBD
putative amino acid permease Tax=AR17
aromatic amino acid permease
rifcsplowo2_01_scaffold_240_16
R_OP11_Roizmanbacteria_39_12c, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

13944..14378
DNA (435bp) protein (145aa)
DNA alkylation repair enzyme superfamily (Fragment) n=1 Tax=uncultured bacterium RepID=K1Z204_9BACT
DNA alkylation repair enzyme superfamily Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12c_curated
DNA alkylation repair protein
rifcsplowo2_01_scaffold_240_17

Not on your lists

14593..15174
DNA (582bp) protein (194aa)
Transcriptional regulator n=1 Tax=sediment metagenome RepID=D9PJD3_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:EFK96348.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
rifcsplowo2_01_scaffold_240_18
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

15167..15604
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
Putative uncharacterized protein Tax=CG_Aenigma_01
rifcsplowo2_01_scaffold_240_19
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

15759..16652
DNA (894bp) protein (298aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=CG_Pacearch_04
thioredoxin-disulfide reductase (EC:1.8.1.9)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373930A
rifcsplowo2_01_scaffold_240_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

16688..17623
DNA (936bp) protein (312aa)
putative circadian clock protein, KaiC Tax=CG_Woesearch_03
hypothetical protein id=5048072 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_240_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(17620..17982)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CDCF0
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsplowo2_01_scaffold_240_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


18132..19589
DNA (1458bp) protein (486aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Woesearch_02
Bifunctional aminoacyl-tRNA synthetase (Fragment) id=5800815 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proline-tRNA ligase
rifcsplowo2_01_scaffold_240_23
unknown

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comp(19555..19812)
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsplowo2_01_scaffold_240_24

Not on your lists

comp(19852..21837)
DNA (1986bp) protein (662aa)
transglutaminase-like superfamily protein id=5049708 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Transglutaminase-like protein superfamily protein {ECO:0000313|EMBL:KHO53565.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Transglutaminase protein
rifcsplowo2_01_scaffold_240_25
unknown

Not on your lists

comp(21952..22290)
DNA (339bp) protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_240_26
archaeon Loki, Lokiarchaeota, Archaea

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comp(22358..23122)
DNA (765bp) protein (255aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Purine nucleoside phosphorylase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N7K5_DESTT
S-methyl-5'-thioadenosine phosphorylase {ECO:0000313|EMBL:KKK44479.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
rifcsplowo2_01_scaffold_240_27

Not on your lists

comp(23163..24230)
DNA (1068bp) protein (356aa)
hypothetical protein
id=5102933 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62214.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_240_28
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(24232..25203)
DNA (972bp) protein (324aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=RBG_13_Pacearchaeota_33_26_curated
Acetate kinase id=4113715 bin=GWF2_OP3_43_52 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
acetate kinase
rifcsplowo2_01_scaffold_240_29
unknown

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comp(25200..25748)
DNA (549bp) protein (183aa)

This feature has no annotations

rifcsplowo2_01_scaffold_240_30
unknown

Not on your lists

comp(25745..26020)
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying items 1-30 of 102 in total

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