ggKbase home page

rifcsplowo2_01_scaffold_449

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_449_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

149..661
-----------------
DNA (513bp)
protein (171aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FB5D0
tRNA-intron endonuclease
rifcsplowo2_01_scaffold_449_2
unknown

Not on your lists

758..1114
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_449_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1137..2360
-----------------
DNA (1224bp)
protein (408aa)
CG32662 gene product from transcript CG32662-RA Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_449_4

Not on your lists

2375..3475
-----------------
DNA (1101bp)
protein (367aa)
RNA methylase n=3 Tax=Sulfolobus acidocaldarius RepID=Q4J9A5_SULAC id=5103052 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase
RNA methylase {ECO:0000313|EMBL:AJF62333.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_449_5

Not on your lists

3500..3733
-----------------
DNA (234bp)
protein (78aa)
30S ribosomal protein S17e n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AF17_PYRYC
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
30S ribosomal protein S17e
rifcsplowo2_01_scaffold_449_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3801..4085
-----------------
DNA (285bp)
protein (95aa)
DNA-binding protein Alba; K03622 archaea-specific DNA-binding protein Tax=RBG_13_Pacearchaeota_36_9_curated
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5043654 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA/RNA-binding protein Alba
rifcsplowo2_01_scaffold_449_7
unknown

Not on your lists

comp(4107..4991)
-----------------
DNA (885bp)
protein (295aa)

This feature has no annotations

rifcsplowo2_01_scaffold_449_8
unknown

Not on your lists

comp(5266..5430)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_449_9
Sulfolobus tokodaii, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(5490..5960)
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=Q970Y2_SULTO
histidine triad nucleotide-binding protein
Uncharacterized protein {ECO:0000313|EMBL:BAB66541.1}; TaxID=273063 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus tokodaii (strain DSM 16
rifcsplowo2_01_scaffold_449_10

Not on your lists


comp(6008..7528)
-----------------
DNA (1521bp)
protein (507aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B52A0
Uncharacterized protein {ECO:0000313|EMBL:KKN45676.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsplowo2_01_scaffold_449_11

Not on your lists


comp(7521..8150)
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003818B6E
Marine sediment metagenome DNA, contig: S03H2_L00255 {ECO:0000313|EMBL:GAH34612.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
diphthamide biosynthesis protein
rifcsplowo2_01_scaffold_449_12

Not on your lists

comp(8152..8631)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003818E2C
ZPR1-like protein zinc finger protein
ZPR1-like protein zinc finger protein {ECO:0000313|EMBL:AJF62317.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_449_13

Not on your lists

comp(8682..9077)
-----------------
DNA (396bp)
protein (132aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9E6_9EURY id=5103035 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62316.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_449_14
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9152..9397)
-----------------
DNA (246bp)
protein (82aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F1392
Uncharacterized protein conserved in archaea Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_449_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9394..9732)
-----------------
DNA (339bp)
protein (113aa)
prefoldin subunit beta; K04798 prefoldin beta subunit Tax=CG_Woesearch_02
erpK protein; K04798 prefoldin beta subunit id=5050960 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta
rifcsplowo2_01_scaffold_449_16
unknown

Not on your lists

comp(9906..10115)
-----------------
DNA (210bp)
protein (70aa)
50S ribosomal protein L37Ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM id=5103031 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L37Ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM Tax=AR20
50S ribosomal protein L37Ae
rifcsplowo2_01_scaffold_449_17
unknown

Not on your lists


comp(10273..11037)
-----------------
DNA (765bp)
protein (255aa)
LSU ribosomal protein L11P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB4_METFV id=5103030 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L11P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB4_METFV Tax=AR20
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_449_18

Not on your lists


comp(11030..11506)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003807E84
LSU ribosomal protein L24A Rpl24A
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_449_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11562..11732)
-----------------
DNA (171bp)
protein (57aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=CG_Woesearch_02
Preprotein translocase subunit SecE id=5050966 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Preprotein translocase subunit SecE
rifcsplowo2_01_scaffold_449_20

Not on your lists

comp(11791..12891)
-----------------
DNA (1101bp)
protein (367aa)
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Cell division protein FtsZ
rifcsplowo2_01_scaffold_449_21

Not on your lists

comp(12976..13683)
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6AAC
Peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_449_22
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

13787..14533
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein
Tax=AR6
rifcsplowo2_01_scaffold_449_23
unknown

Not on your lists


14612..15292
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E9331
50S ribosomal protein L1 n=1 Tax=Methanococcus thermolithotrophicus RepID=RL1_METTL Tax=AR20
50S ribosomal protein L1
rifcsplowo2_01_scaffold_449_24
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


15289..16143
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A27F7
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
rplP0; acidic ribosomal protein P0
rifcsplowo2_01_scaffold_449_25
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

16163..16468
-----------------
DNA (306bp)
protein (102aa)
50S ribosomal protein L12P Tax=AR11
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ribosomal protein 60S
rifcsplowo2_01_scaffold_449_26
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

16494..17417
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820D3D
hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_449_27
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

17404..17997
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FFB32
phosphoesterase PA-phosphatase-like protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
putative membrane protein
rifcsplowo2_01_scaffold_449_28
unknown

Not on your lists

comp(17994..18884)
-----------------
DNA (891bp)
protein (297aa)

This feature has no annotations

rifcsplowo2_01_scaffold_449_29

Not on your lists

comp(18925..19440)
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003787FEB
Uncharacterized protein {ECO:0000313|EMBL:KHO53658.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_449_30
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

19526..20140
-----------------
DNA (615bp)
protein (205aa)
phosphatidate cytidylyltransferase id=5095339 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
phosphatidate cytidylyltransferase Tax=PER_GWF2_38_29
PAP2 family protein
Displaying items 1-30 of 68 in total

View Taxonomy