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rifcsplowo2_01_scaffold_21073

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_21073_1
unknown

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comp(1..525)
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP72_METAC id=5102908 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP72_METAC Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_21073_2
unknown

Not on your lists

comp(549..1979)
-----------------
DNA (1431bp)
protein (477aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21073_3

Not on your lists

2111..2722
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53360.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_21073_4

Not on your lists

2719..3027
-----------------
DNA (309bp)
protein (103aa)
LSU ribosomal protein L44E
Marine sediment metagenome DNA, contig: S01H1_S06877 {ECO:0000313|EMBL:GAG06048.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5050681 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_21073_5
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

3024..3200
-----------------
DNA (177bp)
protein (59aa)
30S ribosomal protein S27E; K02978 small subunit ribosomal protein S27e Tax=CG_Woesearch_03
30S ribosomal protein S27e
30S ribosomal protein S27e id=5800827 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_21073_6
unknown

Not on your lists

3200..3970
-----------------
DNA (771bp)
protein (257aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 id=5103146 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 Tax=AR20
Translation initiation factor 2 subunit alpha
rifcsplowo2_01_scaffold_21073_7
unknown

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4005..4136
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21073_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

4120..4881
-----------------
DNA (762bp)
protein (254aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07159 Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_01_scaffold_21073_9
unknown

Not on your lists

comp(4873..5133)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21073_10

Not on your lists

comp(5178..6392)
-----------------
DNA (1215bp)
protein (405aa)
PHP domain protein id=5800577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PHP protein {ECO:0000313|EMBL:AJF61908.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
PHP protein
rifcsplowo2_01_scaffold_21073_11
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6427..7365)
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein
id=5103142 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_21073_12
unknown

Not on your lists

comp(7367..8275)
-----------------
DNA (909bp)
protein (303aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21073_13
unknown

Not on your lists

comp(8272..9633)
-----------------
DNA (1362bp)
protein (454aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21073_14

Not on your lists

comp(9646..10737)
-----------------
DNA (1092bp)
protein (364aa)
hypothetical protein
id=5103139 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62420.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_21073_15
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(10772..11842)
-----------------
DNA (1071bp)
protein (357aa)
Geranylgeranyl reductase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKY4_THEBM id=5103137 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
geranylgeranyl reductase Tax=CG_Pacearch_04
Geranylgeranyl reductase
rifcsplowo2_01_scaffold_21073_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

11896..12759
-----------------
DNA (864bp)
protein (288aa)
peptidase A24A domain-containing protein; K07991 archaeal preflagellin peptidase FlaK [EC:3.4.23.52] Tax=AR4
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F8341
Peptidase A24A prepilin type IV
rifcsplowo2_01_scaffold_21073_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12756..13382)
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376AB69
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_21073_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13384..13659)
-----------------
DNA (276bp)
protein (92aa)
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=CG_Woesearch_02
Elongation factor 1-beta id=5799999 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 1-beta
rifcsplowo2_01_scaffold_21073_19
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13885..14652
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000361D25C
PHP-like protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
rifcsplowo2_01_scaffold_21073_20

Not on your lists

14882..16015
-----------------
DNA (1134bp)
protein (378aa)
glycosyltransferase id=5042282 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glycosyltransferase {ECO:0000313|EMBL:KHO46780.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
glycosyltransferase
rifcsplowo2_01_scaffold_21073_21
RIFOXYC1_FULL_RIF_OD1_06_38_18_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(16020..16814)
-----------------
DNA (795bp)
protein (265aa)
Conserved membrane protein, possible 4-hydroxybenzoate octaprenyltranferase n=1 Tax=Richelia intracellularis HH01 RepID=M1X2R2_9NOST
UbiA prenyltransferase Tax=RIFOXYC1_FULL_RIF_OD1_06_38_18_curated
hypothetical protein
rifcsplowo2_01_scaffold_21073_22
RIFOXYC1_FULL_RIF_OD1_06_38_18_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(16801..17259)
-----------------
DNA (459bp)
protein (153aa)
UDP-diphosphatase (EC:3.6.1.27) Tax=RIFOXYC1_FULL_RIF_OD1_06_38_18_curated
bcrC2; undecaprenyl-diphosphatase BcrC (EC:3.6.1.27)
Phosphoesterase PA-phosphatase related protein id=4383675 bin=GWC2_Planctomycete_KSU_39_26 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
rifcsplowo2_01_scaffold_21073_23
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17330..18259)
-----------------
DNA (930bp)
protein (310aa)
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA Tax=AR4
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5048364 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA repair and recombination protein RadA
rifcsplowo2_01_scaffold_21073_24
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18274..18501)
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein
id=5103130 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
Displaying 24 items

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