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rifcsplowo2_01_scaffold_27133

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_27133_1
unknown

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1..315
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_2
unknown

Not on your lists

325..879
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_3
unknown

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881..1108
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_4
unknown

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1139..1471
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_5

Not on your lists

1621..2322
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50263.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Putative uncharacterized protein id=5799794 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_27133_6
unknown

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2384..3076
-----------------
DNA (693bp)
protein (231aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_7
unknown

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3101..3352
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_8

Not on your lists

comp(3404..3619)
-----------------
DNA (216bp)
protein (72aa)
DNA/RNA-binding protein Alba n=2 Tax=Methanotorris RepID=F6BCD3_METIK id=5103050 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA/RNA-binding protein Alba
DNA/RNA-binding protein Alba {ECO:0000313|EMBL:AJF62331.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_27133_9
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(3758..3949)
-----------------
DNA (192bp)
protein (64aa)
30S ribosomal protein S17e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYU5_METFV
30S ribosomal protein S17e
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Metha
rifcsplowo2_01_scaffold_27133_10
unknown

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comp(3982..5115)
-----------------
DNA (1134bp)
protein (378aa)
RNA methylase n=3 Tax=Sulfolobus acidocaldarius RepID=Q4J9A5_SULAC id=5103052 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNA methylase n=3 Tax=Sulfolobus acidocaldarius RepID=Q4J9A5_SULAC Tax=AR20
RNA methylase
rifcsplowo2_01_scaffold_27133_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5112..6068)
-----------------
DNA (957bp)
protein (319aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_27133_12
AR17, Woesearchaeaota, DPANN, Archaea

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6250..7362
-----------------
DNA (1113bp)
protein (371aa)
Putative uncharacterized protein Tax=AR17
rifcsplowo2_01_scaffold_27133_13

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comp(7359..7937)
-----------------
DNA (579bp)
protein (193aa)
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
tRNA-intron endonuclease {ECO:0000313|EMBL:AJF62335.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_27133_14
CG_Pacearch_04, Pacearchaeota, Archaea

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7998..8888
-----------------
DNA (891bp)
protein (297aa)
rnz; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=CG_Pacearch_04
RNAse Z n=1 Tax=nanoarchaeote Nst1 RepID=R1E5I6_9ARCH id=5103055 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
RNAse Z
rifcsplowo2_01_scaffold_27133_15
unknown

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comp(8906..9112)
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_16
unknown

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comp(9114..10043)
-----------------
DNA (930bp)
protein (310aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU Tax=AR20
Transcription initiation factor IIB
rifcsplowo2_01_scaffold_27133_17
unknown

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10278..10574
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_27133_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(10601..10765)
-----------------
DNA (165bp)
protein (55aa)
30S ribosomal protein S8; K02995 small subunit ribosomal protein S8e Tax=RBG_13_Woesearchaeota_36_6_curated
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e id=5048696 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8e
Displaying 18 items

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