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rifcsplowo2_01_scaffold_13271

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_13271_1
unknown

Not on your lists

comp(2..1249)
-----------------
DNA (1248bp)
protein (416aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13271_2

Not on your lists

comp(1246..2022)
-----------------
DNA (777bp)
protein (259aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50284.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsplowo2_01_scaffold_13271_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2019..3293)
-----------------
DNA (1275bp)
protein (425aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5046875 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_13271_4

Not on your lists

comp(3322..3738)
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A12F9
Prefoldin subunit alpha
Marine sediment metagenome DNA, contig: S06H3_L04061 {ECO:0000313|EMBL:GAI04216.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_13271_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3735..4076)
-----------------
DNA (342bp)
protein (114aa)
50S ribosomal protein L14 Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L14e id=5800175 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L14e
rifcsplowo2_01_scaffold_13271_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4073..4345)
-----------------
DNA (273bp)
protein (91aa)
50S ribosomal protein L34e n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RL34_METJA
LSU ribosomal protein l34e; K02915 large subunit ribosomal protein L34e Tax=CG_Woesearch_02
ribosomal protein L34e
rifcsplowo2_01_scaffold_13271_7
unknown

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comp(4384..5361)
-----------------
DNA (978bp)
protein (326aa)

This feature has no annotations

rifcsplowo2_01_scaffold_13271_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5364..6125)
-----------------
DNA (762bp)
protein (254aa)
hypothetical protein
hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein id=5041783 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_13271_9

Not on your lists

comp(6127..7530)
-----------------
DNA (1404bp)
protein (468aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translocase subunit SecY {ECO:0000256|RuleBase:RU000537}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Protein translocase subunit SecY
rifcsplowo2_01_scaffold_13271_10

Not on your lists


comp(7527..7952)
-----------------
DNA (426bp)
protein (142aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
rifcsplowo2_01_scaffold_13271_11

Not on your lists


comp(7952..8422)
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719CE9
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
50S ribosomal protein L30P
rifcsplowo2_01_scaffold_13271_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8419..9282)
-----------------
DNA (864bp)
protein (288aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Woesearch_02
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
rifcsplowo2_01_scaffold_13271_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(9284..9820)
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003679C1A
rpl18p; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_13_Bathyarchaeota_46_16b_curated
LSU ribosomal protein L18P
rifcsplowo2_01_scaffold_13271_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9810..10268)
-----------------
DNA (459bp)
protein (153aa)
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=CG_Woesearch_02
ribosomal protein L19e; K02885 large subunit ribosomal protein L19e id=5041777 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L19e
rifcsplowo2_01_scaffold_13271_15

Not on your lists

comp(10265..10831)
-----------------
DNA (567bp)
protein (189aa)
50S ribosomal protein L32e
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5046856 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Large subunit ribosomal protein L32e {ECO:0000313|EMBL:KHO54249.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsplowo2_01_scaffold_13271_16

Not on your lists


comp(10824..11387)
-----------------
DNA (564bp)
protein (188aa)
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12383.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L9; K02933 large subunit ribosomal protein L6 id=5046855 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L6
rifcsplowo2_01_scaffold_13271_17

Not on your lists


comp(11389..11781)
-----------------
DNA (393bp)
protein (131aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 id=5042316 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8
rifcsplowo2_01_scaffold_13271_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11783..12013)
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003729D23
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=CG_Pacearch_06
SSU ribosomal protein S14P
rifcsplowo2_01_scaffold_13271_19

Not on your lists


comp(12010..12525)
-----------------
DNA (516bp)
protein (172aa)
50S ribosomal protein L5 n=2 Tax=Methanotorris RepID=F6BD87_METIK id=5103265 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5
rifcsplowo2_01_scaffold_13271_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12522..13217)
-----------------
DNA (696bp)
protein (232aa)
30S ribosomal protein S4e n=2 Tax=unclassified Thermoplasmatales RepID=M7U2B6_9EURY
30S ribosomal protein S4e; K02987 small subunit ribosomal protein S4e Tax=CG_Woesearch_02
30S ribosomal protein S4e
rifcsplowo2_01_scaffold_13271_21

Not on your lists


comp(13290..13439)
-----------------
DNA (150bp)
protein (50aa)
50S ribosomal protein L24P n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWY8_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsplowo2_01_scaffold_13271_22

Not on your lists


comp(13436..13837)
-----------------
DNA (402bp)
protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5046849 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_13271_23

Not on your lists


comp(13834..14157)
-----------------
DNA (324bp)
protein (108aa)
30S ribosomal protein S17P n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY id=5103261 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS12655.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
rifcsplowo2_01_scaffold_13271_24
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(14154..14399)
-----------------
DNA (246bp)
protein (82aa)
Ribonuclease P protein component 1 n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SL32_9EURY
ribonuclease P subunit P29
Tax=BJP_IG2069_Methanobacteriales_33_27
rifcsplowo2_01_scaffold_13271_25
unknown

Not on your lists

comp(14401..14709)
-----------------
DNA (309bp)
protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUI1_ARCFU id=5103260 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Protein translation factor SUI1 homolog n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUI1_ARCFU Tax=AR20
Protein translation factor SUI1-like protein
rifcsplowo2_01_scaffold_13271_26
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(14706..14909)
-----------------
DNA (204bp)
protein (68aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=AR17
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5042307 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L29
rifcsplowo2_01_scaffold_13271_27

Not on your lists


comp(14899..15648)
-----------------
DNA (750bp)
protein (250aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQL3_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99858.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
30S ribosomal protein S3
rifcsplowo2_01_scaffold_13271_28

Not on your lists


comp(15645..16067)
-----------------
DNA (423bp)
protein (141aa)
50S ribosomal protein L22P n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL22_NANEQ id=5103257 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22P
rifcsplowo2_01_scaffold_13271_29

Not on your lists


comp(16069..16449)
-----------------
DNA (381bp)
protein (127aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5046843 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S19
rifcsplowo2_01_scaffold_13271_30

Not on your lists


comp(16451..16774)
-----------------
DNA (324bp)
protein (108aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12700.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L2
Displaying 30 items

View Taxonomy