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rifcsplowo2_01_scaffold_48537

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_48537_1
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

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comp(305..568)
-----------------
DNA (264bp)
protein (88aa)
seg 15..27 Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
rifcsplowo2_01_scaffold_48537_2
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

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comp(628..840)
-----------------
DNA (213bp)
protein (71aa)
seg 15..27 Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
seg 15..27 id=72185 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsplowo2_01_scaffold_48537_3
AR4, Woesearchaeaota, DPANN, Archaea

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981..1454
-----------------
DNA (474bp)
protein (158aa)
DNA polymerase beta domain-containing protein; K07075 id=5041690 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta domain-containing protein; K07075 Tax=AR4
DNA polymerase beta domain-containing protein
rifcsplowo2_01_scaffold_48537_4
AR13, Pacearchaeaota, DPANN, Archaea

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1451..1798
-----------------
DNA (348bp)
protein (116aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2Y0_FERPA
Putative uncharacterized protein Tax=AR13
hypothetical protein
rifcsplowo2_01_scaffold_48537_5

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comp(1977..2264)
-----------------
DNA (288bp)
protein (96aa)
Histidine triad (HIT) protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THN6_CALNY id=5103048 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:AJF62329.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_48537_6
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2252..2842)
-----------------
DNA (591bp)
protein (197aa)
Putative uncharacterized protein Sb03g025950 n=1 Tax=Sorghum bicolor RepID=C5XNT5_SORBI
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
rifcsplowo2_01_scaffold_48537_7

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comp(2882..3493)
-----------------
DNA (612bp)
protein (204aa)
DNA polymerase III epsilon subunit-like 3'-5' exonuclease n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0P7_9FIRM id=5103582 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S12241 {ECO:0000313|EMBL:GAG07045.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA polymerase III epsilon subunit-like protein 3'-5' exonuclease
rifcsplowo2_01_scaffold_48537_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3596..4606)
-----------------
DNA (1011bp)
protein (337aa)
hypothetical protein
id=3688775 Tax=RBG_13_Pacearchaeota_36_9_curated
id=3688775 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_48537_9
unknown

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4729..4995
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsplowo2_01_scaffold_48537_10
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(5003..6457)
-----------------
DNA (1455bp)
protein (485aa)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=CG_Pacearch_05
Glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_48537_11

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comp(6454..7062)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003818B6E
Marine sediment metagenome DNA, contig: S03H2_L00255 {ECO:0000313|EMBL:GAH34612.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
universal diphthamide biosynthesis domain-containing protein
rifcsplowo2_01_scaffold_48537_12
unknown

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7160..7915
-----------------
DNA (756bp)
protein (252aa)

This feature has no annotations

Displaying 12 items

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