ggKbase home page

rifcsplowo2_01_scaffold_69303

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_69303_1
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1..393)
-----------------
DNA (393bp)
protein (131aa)
id=5044957 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_69303_2
unknown

Not on your lists


651..3014
-----------------
DNA (2364bp)
protein (788aa)
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH id=5103313 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH Tax=AR20
Valine-tRNA ligase
rifcsplowo2_01_scaffold_69303_3
unknown

Not on your lists

3054..3227
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

rifcsplowo2_01_scaffold_69303_4

Not on your lists

3485..4576
-----------------
DNA (1092bp)
protein (364aa)
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 id=5044964 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptide chain release factor subunit 1 {ECO:0000313|EMBL:KHO54564.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
peptide chain release factor 1
rifcsplowo2_01_scaffold_69303_5
unknown

Not on your lists

4611..4952
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsplowo2_01_scaffold_69303_6
unknown

Not on your lists

4990..5310
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_69303_7
unknown

Not on your lists

5355..5717
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_69303_8
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

5758..6243
-----------------
DNA (486bp)
protein (162aa)
segregation and condensation protein B; K06024 segregation and condensation protein B id=5044965 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
segregation and condensation protein B; K06024 segregation and condensation protein B Tax=AR18
Segregation and condensation protein B
rifcsplowo2_01_scaffold_69303_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6412..7632
-----------------
DNA (1221bp)
protein (407aa)
hypothetical protein
Uncharacterized protein Tax=CG_Woesearch_02
id=5044966 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_69303_10
unknown

Not on your lists

7634..8863
-----------------
DNA (1230bp)
protein (410aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY id=5103318 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY Tax=AR20
Glycosyltransferase involved in cell wall biogenesis
rifcsplowo2_01_scaffold_69303_11
unknown

Not on your lists

8857..9507
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY id=5103319 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_69303_12

Not on your lists

9582..9854
-----------------
DNA (273bp)
protein (91aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase subunit L n=2 Tax=Methanobacterium RepID=K6SZJ9_9EURY id=5103326 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit L
rifcsplowo2_01_scaffold_69303_13
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

9851..10384
-----------------
DNA (534bp)
protein (178aa)
ammecr1 domain protein; K09141 hypothetical protein Tax=CG_Aenigma_01
AMMECR1 domain protein; K09141 hypothetical protein id=5044917 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_69303_14
unknown

Not on your lists

10428..10826
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_69303_15
R_RIF_OD1_03_53_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

10951..12336
-----------------
DNA (1386bp)
protein (462aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_53_11_curated
hypothetical protein id=5046333 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_69303_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12377..12958
-----------------
DNA (582bp)
protein (194aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=CG_Woesearch_02
id=5044985 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_69303_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12975..13277
-----------------
DNA (303bp)
protein (101aa)
DNA-directed RNA polymerase subunit n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MBQ2_CALMQ
tfs_rpoM; transcription elongation factor TFS/RNA polymerase subunit M; K03057 transcription elongation factor Tax=AR17
transcription termination factor Tfs
rifcsplowo2_01_scaffold_69303_18
unknown

Not on your lists

13280..13558
-----------------
DNA (279bp)
protein (93aa)
hypothetical protein
rifcsplowo2_01_scaffold_69303_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

13594..14037
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein
id=5044989 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_69303_20
unknown

Not on your lists

14096..14818
-----------------
DNA (723bp)
protein (241aa)
DNA polymerase sliding clamp n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGT4_9EURY id=5103332 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase sliding clamp n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGT4_9EURY Tax=AR20
DNA polymerase sliding clamp
Displaying 20 items

View Taxonomy