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rifcsplowo2_01_scaffold_6558

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_6558_1
unknown

Not on your lists

comp(131..355)
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(610..1908)
DNA (1299bp) protein (433aa)
Transposase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRQ8_METMA
Transposase {ECO:0000313|EMBL:KKH88636.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosa
Mobile element protein
rifcsplowo2_01_scaffold_6558_3
unknown

Not on your lists

2105..2719
DNA (615bp) protein (205aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_4
unknown

Not on your lists

comp(2895..3044)
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_5
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3083..3493)
DNA (411bp) protein (137aa)
Nucleotidyltransferase id=89230 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKQ79514.1}; TaxID=1618706 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_38_7.;"
rifcsplowo2_01_scaffold_6558_6
unknown

Not on your lists

comp(3518..4030)
DNA (513bp) protein (171aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4100..4738)
DNA (639bp) protein (213aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TTM9_9EURY
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
HAD-superfamily hydrolase
rifcsplowo2_01_scaffold_6558_8
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(4735..5724)
DNA (990bp) protein (330aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TTM9_9EURY
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:EMR73286.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales arch
HAD-superfamily hydrolase
rifcsplowo2_01_scaffold_6558_9
unknown

Not on your lists

5833..5997
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_10

Not on your lists

6232..6894
DNA (663bp) protein (221aa)
Methyltransferase n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DWK8_THIND
Marine sediment metagenome DNA, contig: S01H4_L01226 {ECO:0000313|EMBL:GAG72161.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
tam_[C]; methyltransferase
rifcsplowo2_01_scaffold_6558_11
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6891..8162
DNA (1272bp) protein (424aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VWD1_9CYAN
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDX73710.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasci
hypothetical protein
rifcsplowo2_01_scaffold_6558_12
Streptomyces lavendulae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8152..9177
DNA (1026bp) protein (342aa)
MitD n=1 Tax=Streptomyces lavendulae RepID=Q9X5R8_STRLA
MitD {ECO:0000313|EMBL:AAD32720.1}; TaxID=1914 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lavendulae.;"
rifcsplowo2_01_scaffold_6558_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

9170..10309
DNA (1140bp) protein (380aa)
group 1 glycosyl transferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] Tax=RBG_16_Chloroflexi_68_14_curated
putative glycosyltransferase (EC:2.4.-.-); K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] id=5084102 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
glycosyl transferase
rifcsplowo2_01_scaffold_6558_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10306..11037
DNA (732bp) protein (244aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicocc
Uridine phosphorylase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4H7_9CLOT
uridine phosphorylase
rifcsplowo2_01_scaffold_6558_15
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11034..11948
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1IAP0_PSEE4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK15276.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomo
rifcsplowo2_01_scaffold_6558_16
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

11945..13120
DNA (1176bp) protein (392aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW77_METFV
degt/dnrj/eryc1/strs aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ADP77842.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Met
rifcsplowo2_01_scaffold_6558_17
Campylobacter subantarcticus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13121..13996
DNA (876bp) protein (292aa)
oxidoreductase n=1 Tax=Humibacter albus RepID=UPI0003B4F115
oxidoreductase, Gfo/Idh/MocA family
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:AJC91066.1}; TaxID=1388751 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" sourc
rifcsplowo2_01_scaffold_6558_18

Not on your lists

13980..14669
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GID5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKM96632.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ubiquinone biosynthesis protein UbiE
rifcsplowo2_01_scaffold_6558_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14691..15101)
DNA (411bp) protein (137aa)
NUDIX hydrolase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL49_CELLD
NUDIX hydrolase Tax=CG_Woesearch_02
NUDIX hydrolase
rifcsplowo2_01_scaffold_6558_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

15277..16095
DNA (819bp) protein (273aa)
putative Purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine or other phosphorylase family protein n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAQ7_9CREN
purine or other phosphorylase family 1 Tax=CG_Woesearch_03
rifcsplowo2_01_scaffold_6558_21
unknown

Not on your lists

16073..16489
DNA (417bp) protein (139aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17128..17838)
DNA (711bp) protein (237aa)
DNA alkylation repair enzyme superfamily Tax=RBG_16_Euryarchaeota_41_19_curated
Uncharacterized protein id=5800365 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA alkylation repair enzyme
rifcsplowo2_01_scaffold_6558_23

Not on your lists

comp(17835..18662)
DNA (828bp) protein (276aa)
23S rRNA (Adenine2503-C2)-methyltransferase {ECO:0000313|EMBL:KHO51276.1}; EC=2.1.1.192 {ECO:0000313|EMBL:KHO51276.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Dual-specificity RNA methyltransferase RlmN n=1 Tax=SAR86 cluster bacterium SAR86B RepID=J4V516_9GAMM
hypothetical protein
rifcsplowo2_01_scaffold_6558_24
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(18687..20096)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031E1BA7
hypothetical protein; K06888 Tax=RBG_16_Chloroflexi_64_32_curated
hypothetical protein
rifcsplowo2_01_scaffold_6558_25

Not on your lists

comp(20096..21208)
DNA (1113bp) protein (371aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KHO51553.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KHO51553.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Tryptophanyl-tRNA synthetase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUZ5_9EURY
tryptophanyl-tRNA synthetase
rifcsplowo2_01_scaffold_6558_26
unknown

Not on your lists

21280..21975
DNA (696bp) protein (232aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_27
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(21956..22636)
DNA (681bp) protein (227aa)
Putative oxidoreductase FAD/NAD(P)-binding n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APM4_9BACT
Putative oxidoreductase FAD/NAD(P)-binding {ECO:0000313|EMBL:EDZ39210.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group
oxidoreductase FAD/NAD(P)-binding protein
rifcsplowo2_01_scaffold_6558_28
unknown

Not on your lists

comp(22661..22984)
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsplowo2_01_scaffold_6558_29

Not on your lists

comp(23024..23290)
DNA (267bp) protein (89aa)
Protein containing Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal domain {ECO:0000313|EMBL:EFK97627.1}; EC=1.4.1.- {ECO:0000313|EMBL:EFK97627.1};; Flags: Fragment;; TaxID=749907 spec
Glutamate dehydrogenase (NAD(P)+) id=4845865 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Glutamate dehydrogenase (NADP)+
rifcsplowo2_01_scaffold_6558_30

Not on your lists

comp(23287..23913)
DNA (627bp) protein (209aa)
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=5044495 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Glutamate dehydrogenase (NADP)+
Displaying 30 items

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