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rifcsplowo2_01_scaffold_5985

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_5985_1

Not on your lists

1..240
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52059.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_5985_2
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

484..1041
DNA (558bp) protein (186aa)
Conserved hypothetical membrane-spanning protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NF68_METST
Conserved hypothetical membrane protein, peptidase family M50 Tax=AR17
hypothetical protein
rifcsplowo2_01_scaffold_5985_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1075..1305
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Tax=CG_Pacearch_06
hypothetical protein
rifcsplowo2_01_scaffold_5985_4
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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1752..2879
DNA (1128bp) protein (376aa)
Putative helicase, ATP-dependent, intein-containing id=3895635 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative helicase, ATP-dependent, intein-containing id=3895635 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_5985_5
CG_Woesearch_02, Woesearchaeota, Archaea

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2842..4689
DNA (1848bp) protein (616aa)
DEAD/H associated domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Woesearch_02
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
rifcsplowo2_01_scaffold_5985_6
AR15, Woesearchaeaota, DPANN, Archaea

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4679..5797
DNA (1119bp) protein (373aa)
DEAD/H associated domain protein id=5800585 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DEAD/H associated domain protein Tax=AR15
DEAD/H associated protein
rifcsplowo2_01_scaffold_5985_7
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

6319..6750
DNA (432bp) protein (144aa)
Histidine triad (HIT) protein n=1 Tax=uncultured bacterium RepID=K2ELJ1_9BACT
histidine triad (HIT) protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein
rifcsplowo2_01_scaffold_5985_8
CG_Woesearch_02, Woesearchaeota, Archaea

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6774..8234
DNA (1461bp) protein (487aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Woesearch_02
Bifunctional aminoacyl-tRNA synthetase (Fragment) id=5800815 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proline-tRNA ligase
rifcsplowo2_01_scaffold_5985_9

Not on your lists

8846..9223
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377A31C
Uncharacterized protein {ECO:0000313|EMBL:KHO49674.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein
rifcsplowo2_01_scaffold_5985_10
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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9396..11042
DNA (1647bp) protein (549aa)
tktA; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=16979506 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
tktA; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=RBG_16_Aminicenantes_63_16_curated
transaldolase
rifcsplowo2_01_scaffold_5985_11
unknown

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11080..11199
DNA (120bp) protein (40aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5985_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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comp(11302..11748)
DNA (447bp) protein (149aa)
seg id=5093967 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rifcsplowo2_01_scaffold_5985_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11745..13235)
DNA (1491bp) protein (497aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Woesearch_02
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5043588 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
thymidine phosphorylase (EC:2.4.2.4)
rifcsplowo2_01_scaffold_5985_14
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13232..14314)
DNA (1083bp) protein (361aa)
hypothetical protein Tax=AR9
hypothetical protein id=5044164 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_5985_15
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(14596..15264)
DNA (669bp) protein (223aa)
fabG2; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=CG_Micra_01
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVF9_9AQUI
short-chain dehydrogenase/reductase SDR
rifcsplowo2_01_scaffold_5985_16
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

15789..16703
DNA (915bp) protein (305aa)
site-specific DNA-methyltransferase (EC:2.1.1.-) Tax=CG_CP01_01
site-specific DNA-methyltransferase (EC:2.1.1.-); K00599 [EC:2.1.1.-] id=24628734 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1 rbh
site-specific DNA-methyltransferase (EC:2.1.1.-)
rifcsplowo2_01_scaffold_5985_17
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16642..17829
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18IR9_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ52099.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
rifcsplowo2_01_scaffold_5985_18
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(18342..18581)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH50161.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
rifcsplowo2_01_scaffold_5985_19
unknown

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18627..19580
DNA (954bp) protein (318aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5985_20
R_OD1_Adlerbacteria_52_17, Adlerbacteria, Parcubacteria, Bacteria

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comp(19767..20600)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI000237ABE4
ATPase AAA Tax=RIFCSPHIGHO2_02_FULL_OD1_Adlerbacteria_52_17_curated
rifcsplowo2_01_scaffold_5985_21

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20897..23023
DNA (2127bp) protein (709aa)
Probable ATP-dependent DNA helicase {ECO:0000313|EMBL:CBH37905.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBH37905.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Probable ATP-dependent DNA helicase n=1 Tax=uncultured archaeon RepID=D1JH97_9ARCH
putative helicase (recQ-like)
rifcsplowo2_01_scaffold_5985_22
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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23496..23777
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LWN0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB68563.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
rifcsplowo2_01_scaffold_5985_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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23774..24157
DNA (384bp) protein (128aa)
Ribonuclease VapC n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0M2R5_9EURY
PilT protein domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
rifcsplowo2_01_scaffold_5985_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(24151..25908)
DNA (1758bp) protein (586aa)
hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1] Tax=RBG_13_Woesearchaeota_36_6_curated
DNA ligase id=5800225 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP-dependent DNA ligase
rifcsplowo2_01_scaffold_5985_25
unknown

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comp(25948..26310)
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5985_26
unknown

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comp(26365..26664)
DNA (300bp) protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5985_27
unknown

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27098..27277
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5985_28
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(27385..27894)
DNA (510bp) protein (170aa)
NUDIX family hydrolase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UA88_MYXSD
NUDIX family hydrolase Tax=CG_Pacearch_06
NUDIX family hydrolase
rifcsplowo2_01_scaffold_5985_29
unknown

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comp(28210..28662)
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsplowo2_01_scaffold_5985_30
unknown

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28736..28954
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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