ggKbase home page

rifcsplowo2_01_scaffold_9482

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_01_scaffold_9482_1
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

20..409
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377A31C
hypothetical protein
rifcsplowo2_01_scaffold_9482_2
R_Peregrinibacteria_48_14, Peregrinibacteria, Bacteria

Not on your lists

406..813
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237857B
rifcsplowo2_01_scaffold_9482_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


comp(1492..2466)
-----------------
DNA (975bp)
protein (325aa)
ASCG--tRNA--N6-adenosine--threonylcarbamoyltransferase
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
rifcsplowo2_01_scaffold_9482_4
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(2532..2672)
-----------------
DNA (141bp)
protein (47aa)
rifcsplowo2_01_scaffold_9482_5

Not on your lists

comp(2707..3063)
-----------------
DNA (357bp)
protein (119aa)
rifcsplowo2_01_scaffold_9482_6
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3081..4016
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein PF11_0207 n=1 Tax=Plasmodium falciparum (isolate 3D7) PF05_PLAF7">RepID=YPF05_PLAF7
conserved Plasmodium protein
rifcsplowo2_01_scaffold_9482_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4013..4753)
-----------------
DNA (741bp)
protein (247aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D14DC
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_9482_8

Not on your lists

4846..5409
-----------------
DNA (564bp)
protein (188aa)
rifcsplowo2_01_scaffold_9482_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5406..6773
-----------------
DNA (1368bp)
protein (456aa)
Nicotinate phosphoribosyltransferase id=2010408 bin=GWB2_CP_45_9 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
nicotinate phosphoribosyltransferase
rifcsplowo2_01_scaffold_9482_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6786..7709)
-----------------
DNA (924bp)
protein (308aa)
von Willebrand factor type A domain protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBD8_9EURY id=5103597 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
von Willebrand factor type A protein
rifcsplowo2_01_scaffold_9482_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7709..8608)
-----------------
DNA (900bp)
protein (300aa)
Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BLN5_9BACT id=5103596 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_9482_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8617..9612)
-----------------
DNA (996bp)
protein (332aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003787256
magnesium chelatase
rifcsplowo2_01_scaffold_9482_13
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

10178..10456
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1Z1_UNCMA
hypothetical protein
rifcsplowo2_01_scaffold_9482_14
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

10453..10782
-----------------
DNA (330bp)
protein (110aa)
hypothetical protein id=5042184 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsplowo2_01_scaffold_9482_15
unknown

Not on your lists

comp(10820..11605)
-----------------
DNA (786bp)
protein (262aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9482_16
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

11703..12446
-----------------
DNA (744bp)
protein (248aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
putative transcriptional regulator
rifcsplowo2_01_scaffold_9482_17
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(12707..14200)
-----------------
DNA (1494bp)
protein (498aa)
rifcsplowo2_01_scaffold_9482_18
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14209..15009)
-----------------
DNA (801bp)
protein (267aa)
outer membrane adhesin like proteiin, partial n=1 Tax=Erwinia carotovora RepID=UPI0001A44BB3
Ig family protein
Displaying 18 items

View Taxonomy