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rifcsplowo2_01_scaffold_18076

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18076_1
unknown

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comp(499..768)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18076_2
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(765..2954)
-----------------
DNA (2190bp)
protein (730aa)
elongation factor EF-2; K03234 elongation factor 2 Tax=CG_Pacearch_03
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2
rifcsplowo2_01_scaffold_18076_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

3068..3220
-----------------
DNA (153bp)
protein (51aa)
hypothetical protein Tax=CG_Pacearch_02
seg 8..16 id=97308 bin=ACD64 species=ACD64 genus=ACD64 taxon_order=ACD64 taxon_class=ACD64 phylum=TM6 tax=ACD64 organism_group=TM6 organism_desc=unknown
hypothetical protein
rifcsplowo2_01_scaffold_18076_4
R_OD1_Kaiserbacteria_56_24, Kaiserbacteria, Parcubacteria, Bacteria

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3959..4375
-----------------
DNA (417bp)
protein (139aa)
plastocyanin Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_56_24_curated
Blue copper protein id=17222 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Blue (Type 1) copper protein
rifcsplowo2_01_scaffold_18076_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

4494..7139
-----------------
DNA (2646bp)
protein (882aa)
P-type HAD superfamily ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Pacearch_05
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L131_9EURY
ATPase, P-type (transporting), HAD superfamily, subfamily IC
rifcsplowo2_01_scaffold_18076_6
ACD2, Gracilibacteria, Bacteria

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7828..9588
-----------------
DNA (1761bp)
protein (587aa)
Alternative thymidylate synthase-like protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AFF3_9BACT
thyX; putative thymidylate synthase ThyX
hypothetical protein Tax=ACD2
rifcsplowo2_01_scaffold_18076_7
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9583..10134)
-----------------
DNA (552bp)
protein (184aa)
MutT/NUDIX family protein n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2SCF3_9BACL
MutT/NUDIX family protein {ECO:0000313|EMBL:ERK60407.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae AT
NUDIX hydrolase
rifcsplowo2_01_scaffold_18076_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(10198..10467)
-----------------
DNA (270bp)
protein (90aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96) Tax=CG_Pacearch_03
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F464_9CYAN
rifcsplowo2_01_scaffold_18076_9
unknown

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comp(10505..10804)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18076_10
unknown

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comp(10861..11307)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18076_11

Not on your lists

11473..12765
-----------------
DNA (1293bp)
protein (431aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI00037E3757 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38792.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
putative ATPase (AAA+ superfamily)
rifcsplowo2_01_scaffold_18076_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(13050..14402)
-----------------
DNA (1353bp)
protein (451aa)
Dead box RNA helicase n=2 Tax=Methanococcoides burtonii RepID=Q12UP5_METBU
DEAD/DEAH box helicase-like protein Tax=CG_Pacearch_05
DEAD/DEAH box helicase-like protein
rifcsplowo2_01_scaffold_18076_13
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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14586..15458
-----------------
DNA (873bp)
protein (291aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHQ4_9EURY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EET90156.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
rifcsplowo2_01_scaffold_18076_14
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(15455..16408)
-----------------
DNA (954bp)
protein (318aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micra
DNA methylase N-4/N-6 domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHQ3_9EURY rbh
putative DNA methylase N-4/N-6
rifcsplowo2_01_scaffold_18076_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(16410..17330)
-----------------
DNA (921bp)
protein (307aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C6874
transposase Tax=CG_Pacearch_06
Transposase
rifcsplowo2_01_scaffold_18076_16
AR13, Pacearchaeaota, DPANN, Archaea

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17550..18737
-----------------
DNA (1188bp)
protein (396aa)
Uncharacterized protein n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2QWA9_9ENTE
Filamentation induced by cAMP protein Fic Tax=AR13
Fic family protein
rifcsplowo2_01_scaffold_18076_17
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(18847..19107)
-----------------
DNA (261bp)
protein (87aa)
RNP-1 like RNA-binding protein Tax=CG_Pacearch_02
RNA-binding protein RNP-2 id=5099591 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
RNP-1 like RNA-binding protein
rifcsplowo2_01_scaffold_18076_18
unknown

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19259..19369
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

Displaying 18 items

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