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rifcsplowo2_01_scaffold_59920_15

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_36_21

partial RP 32 / 55 MC: 5 BSCG 19 / 51 ASCG 29 / 38 MC: 1
Location: comp(11909..13087)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 25.7
  • Coverage: 241.0
  • Bit_score: 74
  • Evalue 5.90e-11
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 25.7
  • Coverage: 241.0
  • Bit_score: 74
  • Evalue 2.90e-10
probable DNA-directed RNA polymerase alpha chain n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B80 similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 122.0
  • Bit_score: 75
  • Evalue 1.20e-10

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Taxonomy

Halothermothrix orenii → Halothermothrix → Halanaerobiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGCTGGAAAAAGTAAAATGAAAAGTGAAGTGGAAGGAAAAAAATTAGCTGGAACTCGTTTAACTCAAGATGACGAAAAAGTCTTTACAAATGTATTGCGTACGGAGGGGTTTAATCCAAACTTCAAACATCTAAAAAAAGAAGAGTATGCTATTTTTGAAAATGCTCTTTATGAAGTAATACGACAAAGAGGGGCAGTGTGGTATGCTGATTTTGTCATGCCCTTTGGTTCTTATGTAAGAGAATTATATTCTGCTGATCCAACTAAACAAGTAATACTATATTCAGATAGCCGCGCGGGTGTTCGTAAGAGTGAATTATTTGATGAGTATTTAGAAAGCGAAAGGAGTGTTGTTAATAGAATGCTTGATTTAGTTAAAAAAGGAAGCAAAAAGCCAATAGAAGATGTAAAGTTTGAAGATGTCTCCTCGAAATTTGATTATCATGCCCGCGATTATTATCAAAAGATATTCTTTGAATTGCAAACAGCTATTCGGAATGGAAAAACAATTGAGGGATTCATAGAAGAATCTGCTAAAACCGAGAGCGACGCAAAATTTAATGGTCTTATGGATGTTCATATAAGACGCCCTCTGGAACATCTAATGAGAAGAGCATCGAAATTTTCTGTTTCAACTCCTCTTTATTTTTTTAGAAAAAAGCACTTGACAGGCGAATTTGACTCTCTATCATCCAACGTTGTGCAAAGGAGAGAGTTTGAAGAAGAAAACAGGGAACTCCAACAATTATACAAAGAAACTATTTTTGGGCGTGAAATGGAATTTTCTGGACATTTTTTTGATTACGCTCCATTAAGGGGAATATTTGATCAATGCTTAATGGCTTATACATCGGAAGAAACAGCAATGCAATTTATGGAGAGAATATTTAGTTTTCACGTATGTGTTGGAAAGAGAATAGGATTGACAGTAGATTATGTAGACCAATTAAAACCAATAAGTATTGGAAAAGAAGAGTTGTGCTCTAAACCAGTTGCTGATTTGGACTTTTCAGTTAGGGCAAGAAAAACTCTACAAAGACTCAGTGTGACAACAATCAGCGAATTAGTTAATTTAACAGAAGAAAATCTTCTATCTATCAGAGGTTTTGGTCAAAAAAGTTTAATGGAAGTGCGAAAGAGACTCAATGATTTAGGATTAAAACTCAGAGATAATTAA
PROTEIN sequence
Length: 393
MAGKSKMKSEVEGKKLAGTRLTQDDEKVFTNVLRTEGFNPNFKHLKKEEYAIFENALYEVIRQRGAVWYADFVMPFGSYVRELYSADPTKQVILYSDSRAGVRKSELFDEYLESERSVVNRMLDLVKKGSKKPIEDVKFEDVSSKFDYHARDYYQKIFFELQTAIRNGKTIEGFIEESAKTESDAKFNGLMDVHIRRPLEHLMRRASKFSVSTPLYFFRKKHLTGEFDSLSSNVVQRREFEEENRELQQLYKETIFGREMEFSGHFFDYAPLRGIFDQCLMAYTSEETAMQFMERIFSFHVCVGKRIGLTVDYVDQLKPISIGKEELCSKPVADLDFSVRARKTLQRLSVTTISELVNLTEENLLSIRGFGQKSLMEVRKRLNDLGLKLRDN*