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rifcsplowo2_01_scaffold_59920

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_59920_1
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

122..355
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein Tax=AR13
rifcsplowo2_01_scaffold_59920_2
unknown

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comp(950..1129)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_59920_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(1080..1331)
-----------------
DNA (252bp)
protein (84aa)
Marine sediment metagenome DNA, contig: S03H2_S02065 Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_59920_4
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(1378..2514)
-----------------
DNA (1137bp)
protein (379aa)
hypothetical protein
id=5103053 Tax=CG_Pacearch_03
id=5103053 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_59920_5
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

2742..3074
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UYJ0_PYRAB
hypothetical protein Tax=AR19
hypothetical protein
rifcsplowo2_01_scaffold_59920_6
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

3040..3567
-----------------
DNA (528bp)
protein (176aa)
nucleotidyltransferase n=1 Tax=Thermococcus zilligii RepID=UPI00029A3216
Nucleotidyltransferase
Tax=AR19
rifcsplowo2_01_scaffold_59920_7
unknown

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3569..3907
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_59920_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4368..4832)
-----------------
DNA (465bp)
protein (155aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Pacearch_06
tRNA-intron endonuclease n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE73_9EURY id=5103054 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tRNA-intron endonuclease
rifcsplowo2_01_scaffold_59920_9
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

4955..5353
-----------------
DNA (399bp)
protein (133aa)
Translation initiation factor 1A n=3 Tax=Methanocaldococcus RepID=IF1A_METJA id=5103231 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation initiation factor IF-1 Tax=CG_Pacearch_03
Translation initiation factor 1A
rifcsplowo2_01_scaffold_59920_10

Not on your lists

comp(5937..7241)
-----------------
DNA (1305bp)
protein (435aa)
Uncharacterized protein id=5045830 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46443.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_59920_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

7569..8096
-----------------
DNA (528bp)
protein (176aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_59920_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

8093..9865
-----------------
DNA (1773bp)
protein (591aa)
secretory protein kinase; K07332 archaeal flagellar protein FlaI Tax=CG_Pacearch_03
archaeal flagellar protein FlaI
secretory protein kinase; K07332 archaeal flagellar protein FlaI id=5241482 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_59920_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

9866..10744
-----------------
DNA (879bp)
protein (293aa)
hypothetical protein; K07333 archaeal flagellar protein FlaJ Tax=CG_Pacearch_03
archaeal flagellar protein FlaJ
type ii secretion system f domain protein; K07333 archaeal flagellar protein FlaJ id=5241483 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_59920_14
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

10741..11886
-----------------
DNA (1146bp)
protein (382aa)
type II secretion system F domain-containing protein; K07333 archaeal flagellar protein FlaJ Tax=CG_Pacearch_02
archaeal flagellar protein FlaJ
type II secretion system F domain-containing protein; K07333 archaeal flagellar protein FlaJ id=5241484 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_59920_15
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11909..13087)
-----------------
DNA (1179bp)
protein (393aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
probable DNA-directed RNA polymerase alpha chain n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B80
rifcsplowo2_01_scaffold_59920_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13210..14115
-----------------
DNA (906bp)
protein (302aa)
lrpC; Lrp/AsnC family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5240735 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_59920_17
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

14157..15047
-----------------
DNA (891bp)
protein (297aa)
KaiC domain protein, AF_0351 family Tax=CG_Pacearch_03
hypothetical protein id=5048072 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_59920_18
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

15049..15531
-----------------
DNA (483bp)
protein (161aa)
id=5046899 Tax=CG_Pacearch_03
Displaying 18 items

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