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rifcsplowo2_01_scaffold_21481

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_21481_1
R_OD1_Nomurabacteria_40_18, Nomurabacteria, Parcubacteria, Bacteria

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154..354
-----------------
DNA (201bp)
protein (67aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_18_curated
transmembrane_regions id=5044093 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_21481_2
CG_Pacearch_05, Pacearchaeota, Archaea

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363..1046
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FDDC
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsplowo2_01_scaffold_21481_3
CG_Pacearch_02, Pacearchaeota, Archaea

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1088..3439
-----------------
DNA (2352bp)
protein (784aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=CG_Pacearch_02
heavy metal translocating P-type ATPase (EC:3.6.3.4)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000375D33A
rifcsplowo2_01_scaffold_21481_4
CG_Pacearch_05, Pacearchaeota, Archaea

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3876..4310
-----------------
DNA (435bp)
protein (145aa)
nrdR; transcriptional repressor NrdR Tax=CG_Pacearch_05
ATP-cone domain protein; K07738 transcriptional repressor NrdR id=5048290 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
nrdR; transcriptional repressor
rifcsplowo2_01_scaffold_21481_5
GWC1_WS6_36_11, WS6, Bacteria

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4649..8731
-----------------
DNA (4083bp)
protein (1361aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LWK0_HIPMA
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KKP91856.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
anaerobic ribonucleoside-triphosphate reductase
rifcsplowo2_01_scaffold_21481_6
RLO_OD1_Falkowbacteria_42_13, Falkowbacteria, Parcubacteria, Bacteria

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8973..9113
-----------------
DNA (141bp)
protein (47aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_42_13_curated
anaerobic ribonucleoside triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Uncharacterized protein id=5099327 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
rifcsplowo2_01_scaffold_21481_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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9052..9855
-----------------
DNA (804bp)
protein (268aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RBG_16_Micrarchaeota_36_9_curated
nrdG; ribonucleoside-triphosphate reductase-like protein (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZH8_9CLOT
rifcsplowo2_01_scaffold_21481_8
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10016..10447
-----------------
DNA (432bp)
protein (144aa)
dut1; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut1 (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LFT8_ACEWD
rifcsplowo2_01_scaffold_21481_9
unknown

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10829..11089
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21481_10

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11121..11411
-----------------
DNA (291bp)
protein (97aa)
dCMP deaminase (EC:3.5.4.12); K01493 dCMP deaminase [EC:3.5.4.12] id=5090666 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Marine sediment metagenome DNA, contig: S01H1_L00847 {ECO:0000313|EMBL:GAF71035.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsplowo2_01_scaffold_21481_11
unknown

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comp(11347..11481)
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

Displaying 11 items

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