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rifcsplowo2_01_scaffold_24722

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_24722_1
CG_Pacearch_05, Pacearchaeota, Archaea

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23..952
-----------------
DNA (930bp)
protein (310aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAS3_METIK id=5103126 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
replication protein A Tax=CG_Pacearch_05
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsplowo2_01_scaffold_24722_2
unknown

Not on your lists

957..1853
-----------------
DNA (897bp)
protein (299aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24722_3

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1855..2325
-----------------
DNA (471bp)
protein (157aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q905_9CLOT
Inner membrane protein {ECO:0000313|EMBL:KHO55376.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
rifcsplowo2_01_scaffold_24722_4

Not on your lists

3150..5294
-----------------
DNA (2145bp)
protein (715aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A94F2
DNA repair protein RadA {ECO:0000313|EMBL:KHO49987.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
DNA repair and recombination protein RadA
rifcsplowo2_01_scaffold_24722_5
unknown

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5296..5799
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24722_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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5933..7180
-----------------
DNA (1248bp)
protein (416aa)
DNA and RNA helicase Tax=RBG_13_Pacearchaeota_33_26_curated
PHP domain protein id=5800577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PHP protein
rifcsplowo2_01_scaffold_24722_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(7437..8786)
-----------------
DNA (1350bp)
protein (450aa)
Transposase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CK30_9ZZZZ
transposase Tax=CG_Aenigma_01
transposase
rifcsplowo2_01_scaffold_24722_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9035..10303
-----------------
DNA (1269bp)
protein (423aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=RBG_13_Pacearchaeota_36_9_curated
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Probable exonuclease VII, large subunit n=1 Tax=uncultured archaeon RepID=D1JGV0_9ARCH
rifcsplowo2_01_scaffold_24722_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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10300..10524
-----------------
DNA (225bp)
protein (75aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium sp. CAG:389 RepID=R7LNW9_9CLOT
exodeoxyribonuclease VII small subunit Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_24722_10
unknown

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comp(10704..11018)
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24722_11
unknown

Not on your lists

11152..11622
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24722_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

11824..14421
-----------------
DNA (2598bp)
protein (866aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Pacearch_05
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
rifcsplowo2_01_scaffold_24722_13
AR19, Pacearchaeaota, DPANN, Archaea

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comp(14442..15041)
-----------------
DNA (600bp)
protein (200aa)
id=5049669 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR19
rifcsplowo2_01_scaffold_24722_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15035..15445)
-----------------
DNA (411bp)
protein (137aa)
Tax=AR19
rifcsplowo2_01_scaffold_24722_15
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(15678..15935)
-----------------
DNA (258bp)
protein (86aa)
Tax=CG_Pacearch_06
rifcsplowo2_01_scaffold_24722_16
unknown

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16039..16395
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24722_17
unknown

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16396..16584
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

Displaying 17 items

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