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rifcsplowo2_01_scaffold_17130

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_17130_1
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(3..1655)
-----------------
DNA (1653bp)
protein (551aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=CG_Pacearch_05
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=4424975 bin=GWC2_OP3_44_8 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rifcsplowo2_01_scaffold_17130_2
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(2058..2249)
-----------------
DNA (192bp)
protein (64aa)
50S ribosomal protein L24e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5N6_KORCO
rpl24e; 50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_17130_3
unknown

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comp(2249..2935)
-----------------
DNA (687bp)
protein (229aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17130_4
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


comp(2989..3282)
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e Tax=CG_Pacearch_05
30S ribosomal protein S28e
rifcsplowo2_01_scaffold_17130_5
unknown

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comp(3286..3510)
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17130_6
unknown

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comp(3512..3748)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17130_7
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


comp(3793..4092)
-----------------
DNA (300bp)
protein (100aa)
50S ribosomal protein L7Ae n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A0D4_FERFK
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=CG_Pacearch_05
50S ribosomal protein L7Ae
rifcsplowo2_01_scaffold_17130_8
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

4236..4550
-----------------
DNA (315bp)
protein (105aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_17130_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4977..5909)
-----------------
DNA (933bp)
protein (311aa)
galE-3; putative UDP-glucose 4-epimerase (EC:5.1.3.2) Tax=RBG_13_Pacearchaeota_33_26_curated
NAD dependent epimerase/dehydratase family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6R0_METCZ
NAD dependent epimerase/dehydratase family
rifcsplowo2_01_scaffold_17130_10
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists


comp(5919..6959)
-----------------
DNA (1041bp)
protein (347aa)
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Pacearch_05
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein kinase
rifcsplowo2_01_scaffold_17130_11
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(7297..7425)
-----------------
DNA (129bp)
protein (43aa)
Marine sediment metagenome DNA, contig: S06H3_L05621 Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_17130_12
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(7474..7818)
-----------------
DNA (345bp)
protein (115aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_17130_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7820..8218)
-----------------
DNA (399bp)
protein (133aa)
PilT protein domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
PilT protein domain-containing protein id=5085538 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
twitching motility protein PilT
rifcsplowo2_01_scaffold_17130_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8220..8495)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DBC9D
Putative uncharacterized protein Tax=AR19
transcriptional regulator, AbrB family
rifcsplowo2_01_scaffold_17130_15
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(8569..9003)
-----------------
DNA (435bp)
protein (145aa)
metallopeptidase-like protein Tax=CG_Pacearch_05
Metallopeptidase-like protein id=3673925 bin=PER_GWC2_41_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metallopeptidase
rifcsplowo2_01_scaffold_17130_16
unknown

Not on your lists

comp(9268..9687)
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17130_17
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(9735..9956)
-----------------
DNA (222bp)
protein (74aa)
Tax=CG_Pacearch_05
Displaying 17 items

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