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rifcsplowo2_01_scaffold_25047

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_25047_1
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(3..1646)
-----------------
DNA (1644bp)
protein (548aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Pacearchaeota_33_26_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5044963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Valine-tRNA ligase
rifcsplowo2_01_scaffold_25047_2

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comp(1686..2660)
-----------------
DNA (975bp)
protein (325aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037620E7
RNA-directed DNA polymerase {ECO:0000313|EMBL:KHO51789.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RNA-directed DNA polymerase Reverse transcriptase
rifcsplowo2_01_scaffold_25047_3
unknown

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comp(2969..3766)
-----------------
DNA (798bp)
protein (266aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379B1A0
rifcsplowo2_01_scaffold_25047_4
AR4, Woesearchaeaota, DPANN, Archaea

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comp(3834..4253)
-----------------
DNA (420bp)
protein (140aa)
id=5043700 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_25047_5

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comp(4244..4768)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S31847 {ECO:0000313|EMBL:GAG31143.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein id=5043701 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_25047_6
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(4827..6131)
-----------------
DNA (1305bp)
protein (435aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=CG_Pacearch_05
Glutamyl-tRNA(Gln) amidotransferase subunit D n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=GATD_THEKO
glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsplowo2_01_scaffold_25047_7
unknown

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comp(6183..6422)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsplowo2_01_scaffold_25047_8
unknown

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comp(6477..6728)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

rifcsplowo2_01_scaffold_25047_9
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(6759..7076)
-----------------
DNA (318bp)
protein (106aa)
nascent polypeptide associated complex nac; K03626 nascent polypeptide-associated complex subunit alpha Tax=CG_Pacearch_05
Nascent polypeptide-associated complex protein id=5800198 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nascent polypeptide-associated complex protein
rifcsplowo2_01_scaffold_25047_10
RIFOXYD2_FULL_PER_ii_58_15_curated, PER-ii, Bacteria

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comp(7136..7699)
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein Tax=RIFOXYD2_FULL_PER_ii_58_15_curated
id=5044926 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Displaying 10 items

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