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rifcsplowo2_01_scaffold_18281

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18281_1
CG_Pacearch_05, Pacearchaeota, Archaea

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159..1931
-----------------
DNA (1773bp)
protein (591aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Pacearch_05
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium sp. CAG:1000 RepID=R5A3N3_9CLOT
rifcsplowo2_01_scaffold_18281_2
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(1934..2446)
-----------------
DNA (513bp)
protein (171aa)
Tax=CG_Pacearch_05
rifcsplowo2_01_scaffold_18281_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2524..3186)
-----------------
DNA (663bp)
protein (221aa)
Beta-phosphoglucomutase (EC:5.4.2.6)
Beta-phosphoglucomutase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46G16_METBF
glycoprotease/hydrolase, beta-phosphoglucomutase Tax=RBG_13_Bathyarchaeota_38_9_curated
rifcsplowo2_01_scaffold_18281_4

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comp(3189..4097)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO02779.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=73914 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
rifcsplowo2_01_scaffold_18281_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4139..4384)
-----------------
DNA (246bp)
protein (82aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_18281_6
unknown

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comp(4597..4800)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18281_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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4834..6567
-----------------
DNA (1734bp)
protein (578aa)
DNA-binding protein MutS2 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S151_FERPA
DNA mismatch repair protein MutS Tax=RBG_13_Pacearchaeota_36_9_curated
DNA mismatch repair protein MutS
rifcsplowo2_01_scaffold_18281_8
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(6754..9234)
-----------------
DNA (2481bp)
protein (827aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Pacearch_01
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5049673 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Leucine-tRNA ligase
rifcsplowo2_01_scaffold_18281_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9506..9724)
-----------------
DNA (219bp)
protein (73aa)
transposase Tax=RBG_13_Pacearchaeota_36_9_curated
Displaying 9 items

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